Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00973 ATGATTGAACTTCATAGAATCAGTTCAAATCTAGTAGATTGGAACCCTTCTCCGGTAGTATCTTTAGCCACCAGCGTCGATGGTTTGCAGGTCGCCGCTGCCCGTGAAGATGGTTCCTTGGAGATTTGGCTTGTCTCCCCCGGTTCCGTCGGCTGGCACCGTCAGTTGACTATTCATGGAGACCCTAATAAAAGAGTATCCTCACTTATTTGGTGCCGCGGGGTTTCAAGGGGAATGCCACTCGGTCGATTATTCTCATCTAACATCGATGGTTCAGTTTGTAAGTGGGATCTTTCCCATTTGAAACAGAAGCCTGTGCTAGGTTCAATTGGTGTCTCAATCTGGCAAATGGCACTGGCACCATCTATAACTGACTTAGTTAATACTGAAGCAGAGCTTCACCATATGGGGAATGGATATTTGAGTTATAATAATGACAATGATCATGATGAACACGAAACCAGTGACAGTGAAGAAGAGTCCGACTCATCTAATTCTCTTAGAACACTTGAATATCCACGTGTAGCAATTGGTTGTGATGATGGAAGTGTGCGAATGTATGCCATCTCAGACACAGATGAGTTCATGTGTACAAAATCGTTGCCTCGGGTCAGTGGACGCGTTTTAAGTGTGACTTGGAGTACAGACGCAAATTTCATATATTCAGGAAGTAGTGATGGCTTGATACGATGCTGGGATGCTACACTGGGTCGTGAAATCTATAGGATTACGGCTGGGCTTGGAGGTCTGGGCGGTGGACCTGAACTTTGTATTTGGTCATTACTGTCCTTGAGATCTGGGACACTGGTTAGTGCAGACAGCAGTGGTAGCGTCCAGTTTTGGGACAGCCAGCAAGGAACTCTCTTACAAGCACATTCATTGCACAAGGGAGATGTAAATGCACTGGCTGCAGCTCCAACTCATAACCGGGTGTTCTCTGCTGGTTCTGATGGCAAGATTATCCTGTATAAGCTCTCCAGTGAGTCAGTGTCATCCAACAGTGTTGAGTCACCAGCAGTAATGAAGAGATGGATTTATGTTGATTATGTAAGGGCGCATACACATGATGTCAGGGCCTTGACTGTGGCAGTACCGATTTGTCGAGAAGACCCCTTGCCAGATGAGACTAAAAGACCTCGTCGTCTGGAAAAACCCATTGATTTTAGTTACCGTAAATGGGCTCACTTGGGTGTTCCCATGCTGATATCAGCAGGTGTGCTGTTTGCATACTCTGATCATGTGAAGCCTAGTCTATTTGAATTGAAGAGCCCTAAAGTTGGGGAAAGTGCATGGAGTGTTATGAAAAGGCAACTCCCTGGGAGACTACCATTTGCTCATTCTATGATTTTTACTCATGATTCCTCTCGGTTGATAGTAGCTGGCCATGACCAAAGGATATATATTGTGGACGTGAGCAGTTCAGGATTAGTGCATGTCTTTACCCCATCCCGTGAGATGCAAGATGAAGGGTTGCCTCCGACTGAACCTCCCATAACAAGGATGTTTGCCAGTTCTGATGGGCAGTGGCTGGCAGCTGTGAATTGTTTTGGAGATGTATATGTATTCAATCTCGAGATACTAAGGCAGCACTGGTTCATTTCTAGATTAGATGGCGCCTCTGTTACTGCTGGTGGATTTCCTCCCGAGAACAACAATGTACTTATAGTTACAACTTCCTCAAATCAAGTGTATGCATTGGATGTAGAGGCCAAGCAGTTGGGAGAATGGTCAATGCGGCATGCATTTGTTCTTCCAAAGAGATTCCAGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCCTCCTCTACTTCATCTTCTGTTGTTGTTTATAGTGCCAGGGCAATGTGTTTGATCGATTTTGGGTTGCCAGTGGAGCAAGATGATGGTGATCTATCAAATGTTCAAGATTCAATGGTTAGAAATTTACAAAATCATCGCAAGAGGAAACACAGACCTAAGAGGAATTTTGAAATTTTGGAATTCAGGGATCCTGTTTTACACATATCCCATCTTTCGAAAAGTTCCATCTTATTAATAGACAAGCCGTGGTTAGAAGTGGTTAAGAGTTTAGAAGCCCAACCAGTACACAGACATATTTTTGGGACATAA 2115 0.444 MIELHRISSNLVDWNPSPVVSLATSVDGLQVAAAREDGSLEIWLVSPGSVGWHRQLTIHGDPNKRVSSLIWCRGVSRGMPLGRLFSSNIDGSVCKWDLSHLKQKPVLGSIGVSIWQMALAPSITDLVNTEAELHHMGNGYLSYNNDNDHDEHETSDSEEESDSSNSLRTLEYPRVAIGCDDGSVRMYAISDTDEFMCTKSLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDATLGREIYRITAGLGGLGGGPELCIWSLLSLRSGTLVSADSSGSVQFWDSQQGTLLQAHSLHKGDVNALAAAPTHNRVFSAGSDGKIILYKLSSESVSSNSVESPAVMKRWIYVDYVRAHTHDVRALTVAVPICREDPLPDETKRPRRLEKPIDFSYRKWAHLGVPMLISAGVLFAYSDHVKPSLFELKSPKVGESAWSVMKRQLPGRLPFAHSMIFTHDSSRLIVAGHDQRIYIVDVSSSGLVHVFTPSREMQDEGLPPTEPPITRMFASSDGQWLAAVNCFGDVYVFNLEILRQHWFISRLDGASVTAGGFPPENNNVLIVTTSSNQVYALDVEAKQLGEWSMRHAFVLPKRFQEFPGEVIGLSFPPSSTSSSVVVYSARAMCLIDFGLPVEQDDGDLSNVQDSMVRNLQNHRKRKHRPKRNFEILEFRDPVLHISHLSKSSILLIDKPWLEVVKSLEAQPVHRHIFGT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00973 704 Gene3D - 405 653 IPR015943 GO:0005515
Accr3g00973 704 ProSiteProfiles Trp-Asp (WD) repeats profile. 292 333 IPR001680 GO:0005515
Accr3g00973 704 SUPERFAMILY WD40 repeat-like 16 329 IPR036322 GO:0005515
Accr3g00973 704 SMART WD40_4 285 324 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 150 188 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 236 282 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 51 97 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 194 233 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 8 44 IPR001680 GO:0005515
Accr3g00973 704 SMART WD40_4 435 470 IPR001680 GO:0005515
Accr3g00973 704 Gene3D - 135 245 IPR015943 GO:0005515
Accr3g00973 704 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 242 IPR001680 GO:0005515
Accr3g00973 704 Pfam WD domain, G-beta repeat 208 233 IPR001680 GO:0005515
Accr3g00973 704 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 266 572 IPR011047 -
Accr3g00973 704 MobiDBLite consensus disorder prediction 144 166 - -
Accr3g00973 704 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 233 - -
Accr3g00973 704 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 405 IPR044622 GO:0010073|GO:0035266
Accr3g00973 704 Gene3D - 252 365 IPR015943 GO:0005515
Accr3g00973 704 Gene3D - 4 134 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00973 Accr-Chr3 10922376 10928285 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00973 K14548 - qsu:112020584 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00973 3 10922376 10928285 Accr3g00973 3 10922376 10928285 ECH