Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00953 ATGCCAGATCACTACACTCTTTGTGGCATCTTTTTCTCTGCTTTGATCGCCTTGGTTGCCCTCTACAATTTTGTTTTTGCCAGGAAGAGCCATATTGTTTCCTCCGCCGCTTCACCTCAATGCATGAATAGCATAACCACCGCTTCCGGAGAATGCAGATCCCCTGACAGCAGCGGTGAGGTTGATGTCATTATCGTCGGAGCTGGTGTTGCTGGCTCTGCTCTGGCGCACACTCTTGGCAAGGATGGACGCCGAGTACATGTTATAGAAAGAGATTTGAGTGAGCCTGACCGAATTGTTGGGGAGTTGCTGCAACCGGGGGGCTATCTCAAGCTAATTGAGCTTGGGCTTGAAGATTGTGTGAAGGAGATTGATGCGCAGCAAGTTTTTGGGTACGCTCTTTACAAGGATGGAGAAAATACTCGACTCCCATATCCATTGGAGAAGTTTCATTCAGATGTTTCCGGAAGAAGCTTTCACAATGGACGATTTATTCAGAGGATGAGAGAGAAAGCTGCCTCCCTTCCCAATGTACACTTGAAGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATCAAAGGTGTCCATTATAAGACAAAAGATGGCCAAGAATTTTCAGCTTATGCACCTCTTACCATTGTTTGTGACGGGTGTTTTTCAAACTTGCGCCGTTCTCTTTGTAATCCCAAGGTAGACGTTCCGTCTTGTTTTGTTGGTTTGATATTGGAAAACTGTGAACTTCCATATGCAAACCATGGTCATGTTATACTCGCAGATCCTTCACCAATTTTGTTCTATCCTATAAGTAGCACAGAGATTCGCTGTCTGGTTGATGTCCCTGGTCAGAAGGTTCCTTCAGTTTCAAATGGTGAAATGAGCAAGTATTTGAAGACAGTGGTAGCTCCACAGGTCCCCTCTGAGCTTTATGAGGCCTTCATAGCTGCGGTGGACAAAGGCAACATCAGGACAATGCCAAACAGAAGCATGCCGGCTGCTCCTTATCCTACACCTGGAGCCCTTCTAATGGGAGATGCATTTAATATGCGCCATCCTCTTACTGGGGGTGGAATGACTGTGGCCCTTTCTGACATAGTTGTGCTCCGGAATCTCCTCAAGCCTTTACGTGACCTAAATGATTCACACACGCTCTGCAAATATCTCGAGTCCTTCTATACGTTGCGGAAGCCAGTGGCAGCCACCATAAATACGTTGGCGGGAGCCCTATACAAGGTGTTTAGTGCATCTCCTGATAAGGCGAGGAGTGAAATGCGGCAAGCATGCTTTGATTATCTGAGTCTGGGAGGTGTATTCTCGGAAGGACCAATTTCTTTGCTTTCTGGATTGAACCCCCGCCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTTGCAATATACGGCGTTGGCCGTTTGTTGATCCCATTTCCATCGCCCAATCGGGCTTGGATCGGAGCACGATTGATATCCAGTGCTTCTGGAATAATCTTTCCCATAATCAAGGCGGAAGGAGTTCGCCAGATGTTCTTCCCTGCGACCGTCCCAGCTTATTACAGGACACCTCCGTCTAAACAGGAGTGA 1584 0.4716 MPDHYTLCGIFFSALIALVALYNFVFARKSHIVSSAASPQCMNSITTASGECRSPDSSGEVDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVKEIDAQQVFGYALYKDGENTRLPYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVHLKEGTVTSLLEENGTIKGVHYKTKDGQEFSAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILADPSPILFYPISSTEIRCLVDVPGQKVPSVSNGEMSKYLKTVVAPQVPSELYEAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDSHTLCKYLESFYTLRKPVAATINTLAGALYKVFSASPDKARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPNRAWIGARLISSASGIIFPIIKAEGVRQMFFPATVPAYYRTPPSKQE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00953 527 PANTHER SQUALENE MONOOXYGENASE 22 523 IPR040125 GO:0004506|GO:0016126
Accr3g00953 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Accr3g00953 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Accr3g00953 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Accr3g00953 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Accr3g00953 527 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
Accr3g00953 527 FunFam Squalene monooxygenase 2 55 435 - -
Accr3g00953 527 SUPERFAMILY FAD/NAD(P)-binding domain 61 435 IPR036188 -
Accr3g00953 527 Pfam Squalene epoxidase 212 479 IPR013698 GO:0004506|GO:0016020|GO:0050660
Accr3g00953 527 Gene3D - 55 440 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00953 Accr-Chr3 10619901 10629237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00953 43 527 Miscellaneous Gene Families AT1G58440 79.466 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00953 K00511 - qsu:111985237 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00953 3 10619901 10629237 Accr3g00953 3 10619901 10629237 ECH