Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00924 ATGTTTTCTTCTTCATCTTCTGTAAATGGCGACGAGGCTCTTCGACGAAACCGTATCCTCTCAAGCAAGCTCTACTTCGATGTCCCTCAGTTCAAGGTTCCGGTTATCTACTCGAAGTCGTACAATATAGCATTTCTGGGAATAGAGAAATTACACCCATTTGATTCATCTAAATGGGGAAACATTTGTCGACTCCTCATTGCATCTGGAATGCTAGACAAAAATTGCATTGTTGAGCCTCTGGAGGCTTCCAAGGATGATCTCCTAGTGGTGCATTCAGAATCATACTTGAATAGCCTGAAGAGTAGTTCAAACGTTGCTATGATGATTGAGGTACCGCCAGTGGCATTATTTCCCAATTGTCTTCTGCAGCATAAAGTTCTCTTCCCATTTCGGAAGCAGGTTGGAGGGACTATATTGGCAGCAAAACTTGCAATGGAAAGAGGATGGGCCATTAACATAGGTGGAGGGTTCCACCATTGTTCAGCAGAAAAAGGAGGTGGATTTTGTGTGTATGCAGATATTTCTCTATGCATCCGCTTTGCTTTTGTTCAACTAAATATATCAAGGGTAATGATCATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTTGCTAATGACAGCCGAGTCTATATCCTGGATATGTTCAACCCGGGTATATATCCCTTGGATTATGAGGCCAGAGGGTACATAAATCAGATAGTTGAAGTGAAGAGTGGGACACATACAGAGGATTACCTGCAGAAATTAGACAGAGAACTTAAGATTGCTGGGCATAGGTTTGATCCTGAGCTGGTAGTTTATAATGCTGGAACCGACATTCTGGATGGTGATCCATTGGGCAGGTTGAAGATCAGTCCTGAAGGTATTGCCCTTCGAGATGAAAAGGTTTTTCAATTTGCTCGAGAGAAGAATGTTCCAATTGTCATGGTCACATCAGGTGGTTATATGAAGTCCAGTGCAAGAGTCATTGCAGATTCTATAGTCAATCTCTCAAATAGATGTTTGATCGATGTTAGACAAAGCTCAAGGTTCAAATAA 1053 0.4169 MFSSSSSVNGDEALRRNRILSSKLYFDVPQFKVPVIYSKSYNIAFLGIEKLHPFDSSKWGNICRLLIASGMLDKNCIVEPLEASKDDLLVVHSESYLNSLKSSSNVAMMIEVPPVALFPNCLLQHKVLFPFRKQVGGTILAAKLAMERGWAINIGGGFHHCSAEKGGGFCVYADISLCIRFAFVQLNISRVMIIDLDAHQGNGHEMDFANDSRVYILDMFNPGIYPLDYEARGYINQIVEVKSGTHTEDYLQKLDRELKIAGHRFDPELVVYNAGTDILDGDPLGRLKISPEGIALRDEKVFQFAREKNVPIVMVTSGGYMKSSARVIADSIVNLSNRCLIDVRQSSRFK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00924 350 CDD HDAC_classIV 52 335 IPR044150 GO:0004407|GO:0016575
Accr3g00924 350 Gene3D Histone deacetylase domain 33 348 IPR037138 -
Accr3g00924 350 SUPERFAMILY Arginase/deacetylase 30 336 IPR023696 -
Accr3g00924 350 FunFam Histone deacetylase 11 33 342 - -
Accr3g00924 350 PANTHER HISTONE DEACETYLASE 2-RELATED 41 335 - -
Accr3g00924 350 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Accr3g00924 350 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Accr3g00924 350 PRINTS Histone deacetylase superfamily signature 156 179 IPR000286 -
Accr3g00924 350 Pfam Histone deacetylase domain 52 333 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00924 Accr-Chr3 10312327 10315995 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00924 K11418 - qsa:O6P43_019087 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00924 3 10312327 10315995 Accr3g00924 3 10312327 10315995 ECH