Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00875 ATGATAGCTTACCTAGAGCACTTCGTTCACGGAACTGACAAAGAATCAAGGCCCGACGATGACTTTGTCGTCGGCCTCTCCGAAGCGCTTGACCTTCAAGGCACCGTCGACTGTGCACCCAATGGCATGGCCAGTAAAGATTTCGGAGGCTTGCAGTCCGTGAAGCCCTTGGCCCTCATCAGGCCGGCCGCCGCCGATGACATCGCTCGGGTCCTCAAAGCAGCAGCTCGGTCGTCGAATCTGACGATTGCCGCTCGAGGCAACGGCCACTCAATTAACGGCCAGGCTATGGCCGATCAAGGCATCGTCCTGGACATGCGCAGCATGGAGGAGAATATTCGCGTGGTGCGGAGTGGTAATGGCTCAGCCTACGTCGACGTTTCGGCAGGGGCATTATGGGAAGACGTCCTGAAACGGTGCGTACTGGTTGGGTTGGCTCCAAGGTCGTGGACGGATTATCTGGGGTTAACGGTTGGAGGGACGCTTTCAAATGCTGGGGTCAGCGGCCAAACCTTCCGTTACGGTCCCCAAACTTCGAACGTAACGGAATTGGAGGTTGTAACGGGCAAAGGCGATACGTTGGTCTGCTCCCAAACCGAAAATTCCGAACTTTTCTTTGCGGCGTTGGGTGGTTTGGGTCAGTTCGGCATCATCACCAGGGCCAGTGTCGTGCTTCAACAAGCACCAGATATGGTGAGATGGATAAGGGTAGTGTACTCTGAATTTGAAGACTTCACTAGGGATGCTGAGTCGTTGATAACTCGTCAAGAAGACGACTCTTTCGATTACGTGGAAGGGTTCGTATTTGTGAACAGCGACGACCCTGCCAACGGGTGGCCCATTGTTCCATTGGACCCGGACCAAGAGTTCGACCCGAATCAAATCCCCGCCACTTCCGCTGGCCCCGTCCTTTACTGCCTCGAGCTCGCTCTTCACTGTCGTAACTCAGACCACCTTTCTGACGTCGATGCGGATGTGGATAGATTGCTTCGACGGTTGCGATTCCTCCGGGCCTTCAAGTTCCAGGTGGACGTGCCCTACACCGAGTTCTTGCTACGTGTTAAGCGTGCGGAGGAAGACGCTAAAGCCAACGGCATCTGGGACGCCCCTCACCCGTGGCTCAACCTCTTTGTCTCCCGCCACAACATCGTTGATTTTGATCGTGTGGTGTTTAAGGGCATCCTCAGCCAAGGAGTAGGCGGGCCCATCTTGGTCTACCCTCTCTTACGAAGCAAGTGGGATTCTCGAACTTCGGTGGCGTTGCCGGAGAGCGACATCTTCTACATTGTGGCGCTGCTCCGATTTAACCCGCCGCCCCCAAGAGGACCGGCCCCAGAGGAGCTTGTGGCACAAAACCAAGAGATCATTCAGTTCTGCAGCAGCAGAGGGTTTGATTTCAAGCTATATCTTCCTCACTACAAGTGTCAGGAGGATTGGAAGCGACATTTTGGGAATCGATGGACCAGATTCGTGAGCAGAAAGTCCTGTTTTGATCCCTTGTTTATCCTTGCACCTGGACAGAAAATATTCTCCAGAAACCCCCAACCTTAG 1551 0.5429 MIAYLEHFVHGTDKESRPDDDFVVGLSEALDLQGTVDCAPNGMASKDFGGLQSVKPLALIRPAAADDIARVLKAAARSSNLTIAARGNGHSINGQAMADQGIVLDMRSMEENIRVVRSGNGSAYVDVSAGALWEDVLKRCVLVGLAPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTSNVTELEVVTGKGDTLVCSQTENSELFFAALGGLGQFGIITRASVVLQQAPDMVRWIRVVYSEFEDFTRDAESLITRQEDDSFDYVEGFVFVNSDDPANGWPIVPLDPDQEFDPNQIPATSAGPVLYCLELALHCRNSDHLSDVDADVDRLLRRLRFLRAFKFQVDVPYTEFLLRVKRAEEDAKANGIWDAPHPWLNLFVSRHNIVDFDRVVFKGILSQGVGGPILVYPLLRSKWDSRTSVALPESDIFYIVALLRFNPPPPRGPAPEELVAQNQEIIQFCSSRGFDFKLYLPHYKCQEDWKRHFGNRWTRFVSRKSCFDPLFILAPGQKIFSRNPQP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00875 516 PANTHER GULONOLACTONE OXIDASE 21 511 - -
Accr3g00875 516 Pfam FAD binding domain 56 197 IPR006094 GO:0050660
Accr3g00875 516 Gene3D - 106 230 IPR016169 -
Accr3g00875 516 Gene3D - 232 469 IPR016170 -
Accr3g00875 516 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 225 IPR036318 GO:0050660
Accr3g00875 516 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 510 IPR016164 GO:0003824|GO:0050660
Accr3g00875 516 Gene3D - 44 511 IPR016167 -
Accr3g00875 516 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 510 IPR015345 GO:0009690|GO:0019139|GO:0050660
Accr3g00875 516 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00875 Accr-Chr3 9705974 9709643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00875 55 260 Miscellaneous Gene Families AT1G30730 26.636 4.62e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00875 K00279 - jre:108985996 763.451