Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00823 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAAATCTATCATCAGGTATGTGTCACCTGATCTGGCCACTGATGTCATCATTAATGTGGGTGAAGTGAAGTTTTACCTTCATAAGTTCCCTCTCCTGTCTAAGAGTAACAGACTGCAGAAGCTGGCATCAAAGGAAAACGAAGAGAATTCGGATGAAATACACATAGCTGATTTCCCTGGAGGGCCTAAAGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATAACCGTTACGCTTAATGCGTACAACGTTGTGGCTGCCCGTTGTGCAGCAGAGTACCTTGAGATGACCGAGGACATTGAGAAAGGGAACTTAATTTTCAAGATTGAAGTGTTCCTAAACTCGAGTATCTTCCGGAGCTGGAAGGATTCTATCATTGTTCTCCAGACTACTAAATCTCTTCTGCCATGGTCTGAGGATCTGAAGATCATTGCAAGATGCATAGACTCCATAGCTTCAAAAACTTCTGTGAACCCAGAACACATCTTGTGGTCCTACACATATAACCGGAAACTAAGTGAGCCTGATAAAATTACTGAGGACCAGATAGCAACTCAGGAGAAAATCGAGTCGGTTCCTAAGGATTGGTGGGTCGAAGATGTATGCGAGTTGGATATTGATCTTTACAAACGAGTAATGATTGCTGTAAAATCAAAGAGAAGAATGGATGGTGTCATAATTGGGGAGGCTCTAAAGGTCTACGCAGTGAGATGGTTGCCTGAATCTGTTGAAGCATTAGCTTCTGATGCTCATGCTCGGAGGAACAAAACCTTAGTAGAAACAATTGTCTGTTTATTGCCGTCTAACTATGGCGGAGGCTGTTCATGTAGCTTCTTACTGAAGCTATTGAAAGTGGCCATATTAGTTGGAGCAGACGAGTTGTCAAGAGAAGAATTGATGAAGAGCATTAGCTTCAGATTGGATGAAGCTTCTGTTAAAGACTTGTTGATCCCTGCAAGGTCTCCTCAGACAACCATATATGATGTTCAATTAGTACAATATCTTTTGAATGGATGGATGACTTTTGTAAAGGAAAGTTGTGATATGGAAGTTGATGAGTATGGAGACAAAGGAAAAAGCATGTTGAACATCGGCAAATTGGTGGATGGCTACCTAGTGGAAATTGCACATGATTCAAATCTCAGCATGTCTAGTTTCATTGAATTGTCAGAGTCAGTTCCAGAGTTTGCTCGACCAAAGCACGATGGCCTCTACAGAGCTATTGACATTTACTTGAAGGAGCACCCGCGCCTAACAAAAGCAGAAAGGAAGCAGATATGTGGTTTGATGGATGTGAAGAAGTTGACAGAGGAAGCATCCATGCATGCTGCGCAGAACGACCGACTTCCACTTCGAGTTGTAGTGCAGGTTCTCTTCTATGAGCAGCTTAGAGCTTCTGCCAATGTTCGAGCTCTCGGTGGCAATCAATGCGACAAGGATTATGAGAAAACAGCAGGGGAGAATTGTGAGTCATTCAAAGATCAGATGAGCCATTTGAGCATCAAAGATGAAGAAGAGTTCAGTAAGAAAGGGAAACTGAGCAAGAAGAATAGCAAAAGCAGTAAAAGTGGCATGCAGCTTGTACCATCTCGATCGAGGAGAATCTTCGATAAGTTGTGGATTGTGGGGAAAGGACAAGGAGAGAATAGGAGCTCTGAGACTTCAGGGAGTTCTAATAGCCCAACATCAGTAGTCCCTGTAGATACCAAATCATCTGGTTCTTCCTCAAGACAAAGGAGGCATTCTGTCTCGTAG 1806 0.4275 MKFMKLGSKPDALQADGKSIIRYVSPDLATDVIINVGEVKFYLHKFPLLSKSNRLQKLASKENEENSDEIHIADFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDIEKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIARCIDSIASKTSVNPEHILWSYTYNRKLSEPDKITEDQIATQEKIESVPKDWWVEDVCELDIDLYKRVMIAVKSKRRMDGVIIGEALKVYAVRWLPESVEALASDAHARRNKTLVETIVCLLPSNYGGGCSCSFLLKLLKVAILVGADELSREELMKSISFRLDEASVKDLLIPARSPQTTIYDVQLVQYLLNGWMTFVKESCDMEVDEYGDKGKSMLNIGKLVDGYLVEIAHDSNLSMSSFIELSESVPEFARPKHDGLYRAIDIYLKEHPRLTKAERKQICGLMDVKKLTEEASMHAAQNDRLPLRVVVQVLFYEQLRASANVRALGGNQCDKDYEKTAGENCESFKDQMSHLSIKDEEEFSKKGKLSKKNSKSSKSGMQLVPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPVDTKSSGSSSRQRRHSVS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00823 601 MobiDBLite consensus disorder prediction 517 545 - -
Accr3g00823 601 MobiDBLite consensus disorder prediction 564 601 - -
Accr3g00823 601 Pfam BTB/POZ domain 29 118 IPR000210 GO:0005515
Accr3g00823 601 SUPERFAMILY POZ domain 22 115 IPR011333 -
Accr3g00823 601 Pfam NPH3 family 212 457 IPR027356 -
Accr3g00823 601 ProSiteProfiles NPH3 domain profile. 212 481 IPR027356 -
Accr3g00823 601 Gene3D Potassium Channel Kv1.1; Chain A 17 121 IPR011333 -
Accr3g00823 601 CDD BTB_POZ_NPY3-like 22 125 - -
Accr3g00823 601 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Accr3g00823 601 PANTHER OS12G0117600 PROTEIN 26 561 IPR043454 -
Accr3g00823 601 SMART BTB_4 30 128 IPR000210 GO:0005515
Accr3g00823 601 MobiDBLite consensus disorder prediction 562 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00823 Accr-Chr3 9179522 9183136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00823 28 480 EF-hand Containing Proteins AT3G44820 34.694 6.72e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00823 - - gmx:100790291 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00823 3 9179522 9183136 Accr4g00851 4 8035887 8039078 CCT
Accr3g00823 3 9179522 9183136 Accr3g00823 3 9179522 9183136 ECH