Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00744 ATGTCAAAAGTCCTCGGTTTTACTGGAATTGATGATTTTTTCCCCGGGGGTTCAATATATGCTAACCCCAAGGAGCCCAGTCTCCTGTTGTCTCTTGGTCGCCATGTTGATTTATACTTTCCACCTCAGAAGAGATCTCGTACCAGTGTTTCGTTGAAGAGATCACACATCAATGATCCTTTTCTTCTCAGTGGAGAGTGGTTTGAGGCCGAGGAGAAGCAGCAGACATCCATTGAAGATTTGCCTGATGAATGCCTCTTTGAGATCTTCAGAAGGTTGCCGGGAGGTCAGGAAAGGAGCTCATGTGCTTGTGTTTCCAAGCGCTGGCTTTGGCTTTTAAGTAATATTTGCAAGGATGAAATTTGCAGCACCAAAAAGACTAGTCATGAGAATGATGTTACTGAAGAGGAGGCTGATGTTGAGGAATTTGGGGGTGATGGATACCTCTCCCGAGACTTGGAAGGAAAGAAAGCGACTGATGTTGGACTTGCTGCTATTGCTGTTGGGACTGCTTCTCGTGGTGGATTGGGAAAGCTTTCAATCCGTGGAGGCAATTCAGGTTGTGCGGTGACTAATCTTGGTCTAAGGGCAGTTGCCCATGGATGTCCTTCTTTGAAGGTTCTTTCTCTTTGGAATGTTTCTACCATAGATGATGAAGGCCTGATTGAGATTGCTAGTGGATGTCCCCAGTTAAAGAAGCTTGATCTTTGCTATTGTCCCACGATATCTGATAAGGCTTTAATTGCAGTTGCAAAGAACTGCCCTAACCTGACTGAGTTATCAATTGAATCCTGTCCCAGAATTGGTAATGAAGGTCTACAAGCTATTGGGCAGCTTAGCACTAGCCTAAGGTCCTTATCAATTAAAAAATGCACTTCTGTTGGTGATCAGGGAATTGCGAGCCTTTTTTCTTCAGCTTCTTTTCTTCTAACAAAAGTGAAGCTTGAGGCCCTGACAATCTCTGACCTCTCTTTAGCTGTTATTGGACATTATGGTAAGGCAGTTACCGATCTTGCCCTTAAATACCTACCCAATGTTAGTGAGAAAGGGTTCTGGCTCATGGGTTATGGCCACGGGTTGCAGAAGTTAAATTCACTCTCAATTGCATCCTGTGATGGAGTTACAGATATTGGACTTGATGCTTTAGGAAGGGGCTGTCCAAATCTCAAGCACCTGTATCTCTGTAAGAGTGCATTCCTATCAGACTACGGGTTGGTCTCATTTTCCAAAGCTGCTTTATCAATTGAGAGCCTAAAACTTGAGGAGTGCCATAGAGTCACCCAGCTTGGGTTTTTTGGTGTCCTTTTCAATTGTTGTGCCAAATTGAAGGCCCTTGCACTTATAAGCTGCTTTGGGATTAAGGATCGGAAGTTGGTGTTGCCTTCTTTATCTCCTTGCTCACTTCAGTCTCTCTCAATTTGTAACTGTCCCGGATTTGGTGATGCTACAATGGCTTTACTGGGAAAGCTTTGCCCTGAGTTGCAGTATGTTGAATTGAGCAGACTTGAGGGAGTGACTGATGCGGGGTTCCTCCCAGTGCTTTTGAATTCTGAGGCTGGTCTGGCTAAAGTTAATCTCAGTCACTGCATAAATGTGACAGATAAAATAGTTTCATCCCTCGCAAATAAGCATGGCTTGACTCTTGAGGTCTTAAATCTTGATGGTTGTAAGAAGATCAGTGATGTTAGCTTGATGGAAATTGCTGAAAACTGCCCATTGATCTGGGATCTGGATGTGTCTGAGTCTGCAATTACTGATGCCGGTATCTCAGCCCTAGCAGGCAGTGCCATGTTCCATTTGCAAATCTTGTCCTTGTCAGGATGCTCTCTTGTTTCAAACAAGAGCCTGCCGGCTTTGCGAAATATGGGTGAGACCCTTCTGGGATTAAATATCCGCAACTGCAAGGCAATTAATAGCCGTACTATTGGGAAGCTTGTGGAACAGCTCTGGAGGTGTGACATCCTCGCTTGA 1971 0.4455 MSKVLGFTGIDDFFPGGSIYANPKEPSLLLSLGRHVDLYFPPQKRSRTSVSLKRSHINDPFLLSGEWFEAEEKQQTSIEDLPDECLFEIFRRLPGGQERSSCACVSKRWLWLLSNICKDEICSTKKTSHENDVTEEEADVEEFGGDGYLSRDLEGKKATDVGLAAIAVGTASRGGLGKLSIRGGNSGCAVTNLGLRAVAHGCPSLKVLSLWNVSTIDDEGLIEIASGCPQLKKLDLCYCPTISDKALIAVAKNCPNLTELSIESCPRIGNEGLQAIGQLSTSLRSLSIKKCTSVGDQGIASLFSSASFLLTKVKLEALTISDLSLAVIGHYGKAVTDLALKYLPNVSEKGFWLMGYGHGLQKLNSLSIASCDGVTDIGLDALGRGCPNLKHLYLCKSAFLSDYGLVSFSKAALSIESLKLEECHRVTQLGFFGVLFNCCAKLKALALISCFGIKDRKLVLPSLSPCSLQSLSICNCPGFGDATMALLGKLCPELQYVELSRLEGVTDAGFLPVLLNSEAGLAKVNLSHCINVTDKIVSSLANKHGLTLEVLNLDGCKKISDVSLMEIAENCPLIWDLDVSESAITDAGISALAGSAMFHLQILSLSGCSLVSNKSLPALRNMGETLLGLNIRNCKAINSRTIGKLVEQLWRCDILA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00744 656 SUPERFAMILY RNI-like 186 383 - -
Accr3g00744 656 SUPERFAMILY RNI-like 316 652 - -
Accr3g00744 656 SUPERFAMILY F-box domain 72 115 IPR036047 GO:0005515
Accr3g00744 656 Gene3D Ribonuclease Inhibitor 152 251 IPR032675 -
Accr3g00744 656 Gene3D Ribonuclease Inhibitor 514 610 IPR032675 -
Accr3g00744 656 Pfam F-box-like 78 109 IPR001810 GO:0005515
Accr3g00744 656 Gene3D - 70 123 - -
Accr3g00744 656 Gene3D Ribonuclease Inhibitor 252 463 IPR032675 -
Accr3g00744 656 FunFam EIN3-binding F-box protein 1 517 654 - -
Accr3g00744 656 PANTHER UNCHARACTERIZED 354 542 - -
Accr3g00744 656 Pfam Leucine Rich repeat 280 302 IPR001611 GO:0005515
Accr3g00744 656 Pfam Leucine Rich repeat 361 382 IPR001611 GO:0005515
Accr3g00744 656 Pfam Leucine Rich repeat 253 276 IPR001611 GO:0005515
Accr3g00744 656 Pfam Leucine Rich repeat 547 568 IPR001611 GO:0005515
Accr3g00744 656 SMART fbox_2 81 122 IPR001810 GO:0005515
Accr3g00744 656 SMART LRR_CC_2 466 490 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 228 253 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 571 595 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 518 543 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 202 227 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 491 516 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 597 622 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 386 411 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 545 570 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 360 385 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 412 437 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 280 305 IPR006553 -
Accr3g00744 656 SMART LRR_CC_2 254 279 IPR006553 -
Accr3g00744 656 FunFam EIN3-binding F-box protein 1 267 457 - -
Accr3g00744 656 Gene3D Ribonuclease Inhibitor 464 513 IPR032675 -
Accr3g00744 656 FunFam EIN3-binding F-box protein 1 148 266 - -
Accr3g00744 656 FunFam EIN3-binding F-box protein 1 77 114 - -
Accr3g00744 656 CDD F-box_AtTIR1-like 78 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00744 Accr-Chr3 8322537 8325133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00744 K14515 - gmx:100820247 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00744 3 8322537 8325133 Accr4g00792 4 7523193 7525861 CCT
Accr3g00744 3 8322537 8325133 Accr3g00744 3 8322537 8325133 ECH