LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr3g00709	ATGGGATCTCACAAAGAACAAGAACAAGCTAAATGTGCTTGGGTTCATGGACCTATCATCATAGGCGCTGGACCCTCTGGTTTAGCAGTCGCTGCTTGCCTCTCTCAACTTGGTGTCCCCTGTGTTATTCTTGAGAAGAGTGACTGTATTGCTTCTCTATGGAAACACAGAACCTATGACCGTCTTAAACTCCATCTTCCCAGAAAGTTCTGTGAACTTCCCTTGATGGGTTTCCCTCCCAATTTCCCCAAATACCCCACTAAATACCAGTTTGTTTCATACCTTGAGTCATATGCCTCGCACTTCTCAATTCAACCCCGGTTCAATCAAACCGTCACGAAGGCAGAGTTCGACCAAAGTTGCGGCTTTTGGACGGTTCGGACTCAAGATTTTGAATACATTTCCCGGTGGCTTGTAGTGGCCACCGGGGAAAATGCAGAGCCGGTGATTCCTAAAATCTCTGGACTGGAGTCTTTTCATGGGCCTGTTGTTCACACCAGTCTCTTCAAGTCTGGTTCTGATTACAAGAACCAGAGGGTTTTGGTCATTGGGTGTGGGAATTCGGGCATGGAAGCAAGCTTGGATCTTTCCAGGCACAATGCTTTCCCTTTTATGGTCGCAAGGAACACTATACATGTTCTACCTAGGGAGATGTTTGGGTTCTCAACATTTGGAATAGCCATGGCCCTCCTTAAATGGTTTCCTTTAAGATTAGTAGACAAGTGTCTGCTGACGCTGACCAGTTTCATATTGGGAAACACCGATCGTTACGGTCTCCGGCGACCTAAAACAGGACCCATGGAGCTCAAAAACGCCACCGGAAAAACCCCTGTTCTAGACGTCGGAGCAATGTCACACATAAAATCCGGGAAAATTAAGGTGATGCAAGGAGTGAAGGAGATAACGAGAAATAGTGTAAAATTCGTGGATGGCCAAGAGAGAGAGTTCGATGCTATAATCTTAGCAACGGGTTACCGAAGCAACGTGCCTACTTGGCTCAAGGGGAGTGATTTTTTCACAGAAGATGGAATGCCGAGAACGCCCTTTCCTGAGGGTTGGAAGGGAGAGAATGGATTGTATACGGTGGGGTTCACCAGAAGAGGCCTGCTGGGAACTGCCTCTGATGCCACTAGGATCGCCCAAGACATTGCTCCCCGGTGGAGGACCGTCAAGGACAGCAATAACTATTCTAATTCCCAAATTGTCCTGCTTTGGAAGAGCTCGTAA	1227	0.4743	MGSHKEQEQAKCAWVHGPIIIGAGPSGLAVAACLSQLGVPCVILEKSDCIASLWKHRTYDRLKLHLPRKFCELPLMGFPPNFPKYPTKYQFVSYLESYASHFSIQPRFNQTVTKAEFDQSCGFWTVRTQDFEYISRWLVVATGENAEPVIPKISGLESFHGPVVHTSLFKSGSDYKNQRVLVIGCGNSGMEASLDLSRHNAFPFMVARNTIHVLPREMFGFSTFGIAMALLKWFPLRLVDKCLLTLTSFILGNTDRYGLRRPKTGPMELKNATGKTPVLDVGAMSHIKSGKIKVMQGVKEITRNSVKFVDGQEREFDAIILATGYRSNVPTWLKGSDFFTEDGMPRTPFPEGWKGENGLYTVGFTRRGLLGTASDATRIAQDIAPRWRTVKDSNNYSNSQIVLLWKSS	408

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr3g00709	408	SUPERFAMILY	FAD/NAD(P)-binding domain	19	209	IPR036188	-
	Accr3g00709	408	FunFam	Flavin-containing monooxygenase	18	392	-	-
	Accr3g00709	408	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	17	39	-	-
	Accr3g00709	408	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	136	144	-	-
	Accr3g00709	408	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	175	199	-	-
	Accr3g00709	408	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	33	-	-
	Accr3g00709	408	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	19	388	-	-
	Accr3g00709	408	PRINTS	FAD-dependent pyridine nucleotide reductase signature	179	197	-	-
	Accr3g00709	408	PRINTS	FAD-dependent pyridine nucleotide reductase signature	18	37	-	-
	Accr3g00709	408	SUPERFAMILY	FAD/NAD(P)-binding domain	178	388	IPR036188	-
	Accr3g00709	408	Pfam	Pyridine nucleotide-disulphide oxidoreductase	19	208	-	-
	Accr3g00709	408	Gene3D	-	18	392	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr3g00709	Accr-Chr3	7954648	7956777	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr3g00709	K11816		-	qsa:O6P43_019404	689.493