Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00699 ATGCTTTTCAATAATTCTCGTCATGTACTCTTCTTAGTTCGTTCCCTTTTGCTAAGGCAGCTTCTTCCATTATTTAGAGCTCAAAATCGACGCTTCTTTTCCTCTTCGGCACAATCATGTCTATCTATGCCGGGTAGCTCTATCATCGATTGGCCATCACTACCGATCCCAGAACGCAACCCGAACCCGAACCTGAAATCGAATGCAGCCCCTAACTTCTCGCGGGATGACTTCTCCGTCATTGCCAATCTCTTTGTCGACCCTTCCATCTCTCAGGGTCCAGCTCTAGATAATGCGCTCGATGAGTCCGGGATTGAACCGGATCCGGCTCTGCTGCAAGCGGTATTCGATCATTTCGGTTCTTCCCCAAAGTTGCTACACTCACTGTTTCTTTGGGCTCAGAAGCGACCGGGGTTCGGGCCCAGCTTGACGCTTTTCAACTCTATGATCAACGTTCTTGCCAAATCGAGGGAGTTTGACTCCGCTTGGATTTTGCTTCTTGAACGGATTGATCGCCACGAGGAAGCCGTTTTCGTTTCAGGGGATACTTTTGCTATAATGATCAGACGGTATGCGCTTGCAGGCATGCCACAACCTGCAATTCGAACATTCGAGTATGCTAGAAATTTAAAGCCAATTATGGATTCGGATTCAGAAATGAGATTGTTTGAGATATTGTTGGATTCACTTTGTAAAGAAGGGTCTGTCATGGCAGCTTCAGAGTATTTCCTTCAGAGAAAGAAGATGGACCCATCTTGGGTCCCATCAGTTCGGATTTATAATATTATGCTAAATGGATGGTTTCGATCAAGGAAACTCAAACATGCTGAAAGATTTTGGGCAGAGATGAAGGAGGGGAATGTAAGACCAAGTGTGGTGACTTATGGCACCCTTGTGGAAGGATATTGCCGGATGCGTCGTGTTGAAAAGGCAATTGAATTGGTTAATGATATGATCAGACAAGGAATTGAACCGAATGCAATTGTGTATAATCCAATAATTGATGCTTTAGCAGAGGCTGGGAGATTCAAAGAGGCTTTGGGTATGCTGGAGCGCTTTCTTGTTTTAGAAACAGGCCCAACTAACTCAACTTACAATTCTTTGGTAAAGGGATTTTGTAAGGCAGGAGATCTTGTTGGTGCCAGTAAGATTCTTAAGATGATGATAAGTAGGGGTTTCATCCCCAGTCCCACCACCTATAACTACTTCTTTAGGTACTTTTCAAGATGTAGGAAAGTTGATGACGGTATGAACCTCTATATGAAGATGATTGAATCTGGTTATACTCCTGATCGGCTTACTTATCATCTTTTAGTGAAGATGCTATGTGAAGAGGGGAAATTGAACTTGGCAATTGAAGTTAGTAAGGAAATGAGGCATGAGGGATATGACATGGACCTTGCCACAAGTACTATGTTGGTTCATTTGCTATGCAAAATGCATAGGTTGGAAGAGGCTTTTGCAGAATTTGAGGACATGATACGGAGGGGTATAGTTCCTCAGTATCTCACATTTCAGAGAATGAATAGTGCATTAAAGAAGCGAGGGATGATTGAAATGGCACGAAAACTACGCAGCCTGATGTCTTCTGTCCCTCATTCTACTAAGTTGCCAAATACATATGTTGAAGACATAGATGAAGCACATGCCCGAAGACAATCTATAATGCAGAAGGCCAAAGCATTTTCTGATATGCTGAAAGACACCAAGGACCCCAGAGAACTTGCCAAATATAGAAACTCATCAGAAAATGCTGTCTCCAGTGCTGAGTGTTTGATGGATAATATTAAGAAAAGGATAAAGAAGCCATGA 1812 0.4299 MLFNNSRHVLFLVRSLLLRQLLPLFRAQNRRFFSSSAQSCLSMPGSSIIDWPSLPIPERNPNPNLKSNAAPNFSRDDFSVIANLFVDPSISQGPALDNALDESGIEPDPALLQAVFDHFGSSPKLLHSLFLWAQKRPGFGPSLTLFNSMINVLAKSREFDSAWILLLERIDRHEEAVFVSGDTFAIMIRRYALAGMPQPAIRTFEYARNLKPIMDSDSEMRLFEILLDSLCKEGSVMAASEYFLQRKKMDPSWVPSVRIYNIMLNGWFRSRKLKHAERFWAEMKEGNVRPSVVTYGTLVEGYCRMRRVEKAIELVNDMIRQGIEPNAIVYNPIIDALAEAGRFKEALGMLERFLVLETGPTNSTYNSLVKGFCKAGDLVGASKILKMMISRGFIPSPTTYNYFFRYFSRCRKVDDGMNLYMKMIESGYTPDRLTYHLLVKMLCEEGKLNLAIEVSKEMRHEGYDMDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFQRMNSALKKRGMIEMARKLRSLMSSVPHSTKLPNTYVEDIDEAHARRQSIMQKAKAFSDMLKDTKDPRELAKYRNSSENAVSSAECLMDNIKKRIKKP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00699 603 NCBIfam pentatricopeptide repeat 293 327 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 364 396 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 434 466 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 259 291 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 328 352 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 399 431 IPR002885 -
Accr3g00699 603 NCBIfam pentatricopeptide repeat 471 500 IPR002885 -
Accr3g00699 603 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 223 565 - -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 361 395 IPR002885 -
Accr3g00699 603 Pfam PPR repeat family 361 405 IPR002885 -
Accr3g00699 603 Pfam PPR repeat family 255 304 IPR002885 -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 256 290 IPR002885 -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 396 430 IPR002885 -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 466 500 IPR002885 -
Accr3g00699 603 Pfam PPR repeat 427 459 IPR002885 -
Accr3g00699 603 Pfam PPR repeat 322 351 IPR002885 -
Accr3g00699 603 SUPERFAMILY HCP-like 239 456 - -
Accr3g00699 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 326 360 IPR002885 -
Accr3g00699 603 Gene3D Tetratricopeptide repeat domain 88 244 IPR011990 GO:0005515
Accr3g00699 603 Pfam PPR repeat 146 166 IPR002885 -
Accr3g00699 603 Pfam PPR repeat 470 498 IPR002885 -
Accr3g00699 603 Gene3D Tetratricopeptide repeat domain 245 320 IPR011990 GO:0005515
Accr3g00699 603 Gene3D Tetratricopeptide repeat domain 321 388 IPR011990 GO:0005515
Accr3g00699 603 Gene3D Tetratricopeptide repeat domain 389 458 IPR011990 GO:0005515
Accr3g00699 603 Gene3D Tetratricopeptide repeat domain 459 531 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00699 Accr-Chr3 7890181 7892327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00699 253 601 Glycosyltransferase AT1G05670 22.881 4.25e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00699 - - gmx:100793484 813.527