Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00672 ATGGCTGATGACAAAGGAGTTGGAGAAGGTGAAAACAAACAGACAAGTCCTACTGCCACTGCTAATAGAAACAAGCGCCAGGGATTTATTGCCCGACTTTGGAATGGAATATTTAGATTACATGGAGATGATTTCGAAAAGAGACTGCAATACATTTCTAAAGAAGAAGCTGCTGTTTTGACTAGAATGAACAGGAGATCTCAATCATGGAGGCAAACAACTCGGCATCTTATTGTGTTTTCAATTATATTTGAGGTCGTTGCCGTAGGTTATGCTATTATGACGACAAGATCAGTGGATATGGATTGGAGGATGAGAGCATTCAGGGTCATGCCCATGTTTCTTTTCCCCGCTTTGTCATCTGCTGCTTATTCAGCAGTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAACAAAAATTGATGAGCTTAAAGAGAAGACAAATTATTACACTACTCAACAGCTCATTCAGAGATATGATCCAGACCCGGCAGCAAAGGCAGCGGCAGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGCTTGAAAGTTTATTTAGGGGATGAATCAAATCTCAATGCTTCAACAGGGGTGAGCAATGATGTTGAATTTGTACAATCTGGTGGACTTCGAAATCGAAAACAAGTGCAGTCTAAATATACCACTCCAGGTGCAACCACACCAAAGCTTCATCCTGATCAACAAATTGGTGGAGCCGGTGAAACAGAAGAAGGTCCGACTTCTGAGCATAACCAGCTTATAGTTGTTGAACACCACCAACCTCAGAGTTCATCCACAAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTGGTGGGTGAGGATCCAACGCAGTCTTATGCACTTATATGTGGTAACTGCCATATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCTTTCATCACTTACTTTTGCCCGCACTGTCAAGCCTTGAACAAGCCTAGGAATTCAGATGAGGTTGTCCCTGCTTTAAGTTCCCCAAAAATGGAGTTTCGAAACACAGACGTTGCTGCGGCAGTTAAAACTACCTTGGATTCTGCCGGCGACAGCTCAATCACAAACAATAGTCCCGTTGATCCAAGCTCAATCACAAACAATAGTCCCGTTGGTTCTCATGCCGAGATTGAGGAAATATCTGAAGGGCCAGATTTGGGGGGGCACAGCTAG 1236 0.4401 MADDKGVGEGENKQTSPTATANRNKRQGFIARLWNGIFRLHGDDFEKRLQYISKEEAAVLTRMNRRSQSWRQTTRHLIVFSIIFEVVAVGYAIMTTRSVDMDWRMRAFRVMPMFLFPALSSAAYSAVVSFTRMCDRRDQKILERLRAERQTKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGDESNLNASTGVSNDVEFVQSGGLRNRKQVQSKYTTPGATTPKLHPDQQIGGAGETEEGPTSEHNQLIVVEHHQPQSSSTNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYFCPHCQALNKPRNSDEVVPALSSPKMEFRNTDVAAAVKTTLDSAGDSSITNNSPVDPSSITNNSPVGSHAEIEEISEGPDLGGHS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00672 411 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 24 389 IPR040115 GO:0071786
Accr3g00672 411 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g00672 411 MobiDBLite consensus disorder prediction 369 411 - -
Accr3g00672 411 MobiDBLite consensus disorder prediction 369 395 - -
Accr3g00672 411 MobiDBLite consensus disorder prediction 226 262 - -
Accr3g00672 411 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 285 335 IPR019273 -
Accr3g00672 411 Coils Coil 139 162 - -
Accr3g00672 411 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00672 Accr-Chr3 7549902 7553015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00672 K23292 - gmx:100797087 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00672 3 7549902 7553015 Accr4g00725 4 6937873 6940861 CCT