Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00604 ATGGCGTCAGCTTGCAGGGTTTTAGTATCAGTGAGGAAGAGGTACGCTGGAAGGTTCAACTTTCTAGCTCTTCTTTCAGGCTCTCACCATTTGAATTTCCACAATGAATCAAGTTCAAATCCCTTGCTCGTCGAATTACTTCGGGGATCCAATTCGCGCCTTAAAGCTACGCTCGACCAGGAATTTTGTTCCCTTAAAAGCTCCGAATTTTCTTGGGAATCTCTGGTTACCTGTCTTAGGCCTTCTTCTCCTGAGAAAGCTCGGCTGGTTCTGGAATGGGTTTTGGAGAAATTGGTGAAAGAAAATGAGAAAAATCACAGTGCCTTCTCCGATTACATATTTCTTTGCGGCAAGCTTCAGAATGTGCCACTCGCAATGCAAGCGTTTGCTTCTATGGAGGCTAATGGAGTTAAACCCACCTCCCTGGTTTTTAATTCCCTCATAAATGCTTGCTTGTGTTCCAATGATATTAGTACAGCTTTTAGCTTATTTGAGATCATGGAAAGTTCAGAGAGCTATAAACCTGATTTTCAAACTTTTAATATGTTCATTACAGCATTTTCAATGTCAGGAAAAATTGATGCCATGTTAGGCTGGTACTCAGCTAAAAAAGCTGCTGGATTCGGTCCTGATCTTCAAACATTCGAGTCTCTTGTATCAGGTTGTATCAAATCAAGAAATTTTGAACTAGCTGATGAAATTTATGAAGAAATGATGTCATCAGGAATTATACCTAGCATATCCATTCTAGAAAACATGCTTGAAGGGCTTTGCAAGCAAAAGAGTTTGGGTCGAGCTGAGGAGTTCTTTAAGTACGTGATAGGTGTCAGATGGGAGATCAATGAAAACATGACTGATAAATTAATGGCACTGTATCAAGAAATTGGGCAAGTGGAGAAGATGGAGAAGCTGCTTGAAACTATGATGAAGTCCCATTCTATTACCGATGGAGTCTTCTCCCGAATTCACTGCGGGCTTATACGAATGTATGCCAAACTGGATAGATTGGATGATGTGGAATTTGCTGTGGGAAGCATGTTGAAACAGGGGCTGTCATTCACAAGTTCAGATGATGTTGAAAAGGTTATCTGCTCATACTTCAGAAGAGAAGCTTATGATAGGCTAGAAATATTCTTGGAATGCATAGGGACTAGCTATACGCTGAGCAGATCCACTTACGATTTGTTGATATCTGGCTATAGAAGAGCTGGATTATACGAAAAAGTAGATTCAATGATCGAAGCCATGAAATCAGCTGGGGTTACGTAA 1269 0.4066 MASACRVLVSVRKRYAGRFNFLALLSGSHHLNFHNESSSNPLLVELLRGSNSRLKATLDQEFCSLKSSEFSWESLVTCLRPSSPEKARLVLEWVLEKLVKENEKNHSAFSDYIFLCGKLQNVPLAMQAFASMEANGVKPTSLVFNSLINACLCSNDISTAFSLFEIMESSESYKPDFQTFNMFITAFSMSGKIDAMLGWYSAKKAAGFGPDLQTFESLVSGCIKSRNFELADEIYEEMMSSGIIPSISILENMLEGLCKQKSLGRAEEFFKYVIGVRWEINENMTDKLMALYQEIGQVEKMEKLLETMMKSHSITDGVFSRIHCGLIRMYAKLDRLDDVEFAVGSMLKQGLSFTSSDDVEKVICSYFRREAYDRLEIFLECIGTSYTLSRSTYDLLISGYRRAGLYEKVDSMIEAMKSAGVT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00604 422 Pfam PPR repeat 214 243 IPR002885 -
Accr3g00604 422 Pfam PPR repeat 391 421 IPR002885 -
Accr3g00604 422 NCBIfam pentatricopeptide repeat 143 176 IPR002885 -
Accr3g00604 422 NCBIfam pentatricopeptide repeat 392 421 IPR002885 -
Accr3g00604 422 NCBIfam pentatricopeptide repeat 214 246 IPR002885 -
Accr3g00604 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 422 IPR002885 -
Accr3g00604 422 Gene3D Tetratricopeptide repeat domain 196 322 IPR011990 GO:0005515
Accr3g00604 422 Gene3D Tetratricopeptide repeat domain 323 422 IPR011990 GO:0005515
Accr3g00604 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Accr3g00604 422 PANTHER EXPRESSED PROTEIN 34 421 IPR044179 GO:0003729
Accr3g00604 422 Pfam Pentatricopeptide repeat domain 120 151 IPR002885 -
Accr3g00604 422 Gene3D Tetratricopeptide repeat domain 43 194 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00604 132 421 Glycosyltransferase AT1G05670 19.732 2.89e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00604 - - gmx:100778561 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00604 3 6796523 6798284 Accr3g00604 3 6796523 6798284 ECH