Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00509 ATGGCTGTTTCAACCAGCTTCTCTGGTGGCAAATTGGAGGCCTTGTTGCTTAAATCTTCTTCCCCTGCGTCCAGGGCATCCGCTGCTGCCCGTTTATCGGATTTTGGCAAACCCATTACAATTAAGAAGACCCTGATTCAGAGAGGAATAATTCGCTGCGAGGCTGCTGTTCCTGAGGTGTTGATCAAGGCTGATGATCCGAGTAATGGTAACAGCGTCTCTGCTCTTGAGCAGCTCAAGACTTCAGCTGCTGACAGATATACAAAGGAAAGGAGCAGCATTGTGGTCATTGGGCTCAGTGTGCACAGCACACCTGTGGAAATGCGAGAAAAGCTTGCCATTCCAGAAGCAGAATGGCCTCAAGCCATTGCAGACCTGTGTGGTCTGAATCATATTGAAGAAGCTGCTGTTCTGAGCACCTGCAACAGAATGGAGATATATGTTGTTGCTTTGTCCCAGCACCGTGGCGTCAAAGAGGTCACTGAATGGATGTCAAAGAAAAGTGGTGTCCCTGTTTCGGAACTTTGCGAGCATCGGTTCTTGCTTTACAACAAGGATGCTACACAGCATCTTTTTGAAGTATCTGCAGGTCTTGACTCTCTTGTATTGGGAGAAGGTCAAATCCTTGCGCAGGTTAAACAAGTAGTTAAAGTTGGACAGGGGATTAATGGCTTTGGGAGAAACATCAGTGGCTTGTTCAAACACGCGATCACTGTGGGGAAGAGGGTCAGAACTGAAACGAATATTGCTGCTGGTGCGGTTTCTGTAAGCTCAGCTGCTGTTGAATTGGCCTTGATGAAACTACCTGAAGCCTCACATGATAAGGCCAGGATGTTGGTTATTGGGGCAGGCAAGATGGGAAAGCTTGTAATCAAACATTTGGTGGCTAAAGGTTGTACCAAGATGGTGGTTGTTAATAGAACTGAGGAGAGAGTTATAGCGATCCGTGAAGAAATTAAGGATGTTGAAATTATATATAAACCCCTTTCAGAAATTCTCTCATGTGCTGGTCAAGCAGATGTCATTTTTACCAGCACTGCATCAGAAAGCCCCCTGTTCTTGAAAGATCATGTGCAGGACCTTCCTCCTGCTAGTCAAGACGTTGGAGGGCTTCGTCACTTTGTTGATATCTCTGTTCCTCGCAATGTTGGTTCTTGTGTCTCAGATGTTGATTCTGTGAAAGTCTACAATGTTGATGACCTTAAGGAGGTTGTGGCTGCTAATAAAGAAGACCGGCTAAGAAAAGCTATGGAGGCTCAGGCAATCATTACCGAGGAGTCCAAACAATTCGAAGCTTGGAGGGACTCTCTGGAAACGGTTCCCACCATCAAGAAATTGAGGGCTTATGCCGAAAGAATCAGAGCTGCAGAGCTTGAGAAATGCCTAAGCAAGATGGGAGATGATATCCCAAAGAAGACAAGGAGAGCTGTGGATGACCTTAGCCGGGGCATAGTGAATAAGCTGCTCCATGGTCCAATGCAGCACCTAAGATGTGATGGGAGTGACAGCCGGACCCTTAGTGAGACCCTCGAGAACATGCATGCTTTGAATAGAATGTTCAGTCTTGAGACAGAAGTATCAATCTTGGAGCAGAAAATTCGAGCCAAGGTGGAACAAAATCAGAAGTAA 1629 0.4616 MAVSTSFSGGKLEALLLKSSSPASRASAAARLSDFGKPITIKKTLIQRGIIRCEAAVPEVLIKADDPSNGNSVSALEQLKTSAADRYTKERSSIVVIGLSVHSTPVEMREKLAIPEAEWPQAIADLCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKKSGVPVSELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGINGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHDKARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVIAIREEIKDVEIIYKPLSEILSCAGQADVIFTSTASESPLFLKDHVQDLPPASQDVGGLRHFVDISVPRNVGSCVSDVDSVKVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVSILEQKIRAKVEQNQK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00509 542 FunFam Glutamyl-tRNA reductase 252 411 - -
Accr3g00509 542 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 418 522 IPR015896 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 FunFam Glutamyl-tRNA reductase 93 252 - -
Accr3g00509 542 NCBIfam glutamyl-tRNA reductase 94 502 IPR000343 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 Gene3D - 253 405 - -
Accr3g00509 542 ProSitePatterns Glutamyl-tRNA reductase signature. 190 213 IPR018214 GO:0008883
Accr3g00509 542 Gene3D - 92 252 IPR036343 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 Pfam Shikimate / quinate 5-dehydrogenase 262 404 IPR006151 -
Accr3g00509 542 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 416 502 IPR036453 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 Hamap Glutamyl-tRNA reductase [hemA]. 93 520 IPR000343 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 CDD NAD_bind_Glutamyl_tRNA_reduct 94 416 - -
Accr3g00509 542 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 4 539 - -
Accr3g00509 542 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 93 249 IPR036343 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 97 247 IPR015895 GO:0008883|GO:0033014|GO:0050661
Accr3g00509 542 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 252 412 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00509 K02492 - qsa:O6P43_015417 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00509 3 5838090 5840967 Accr3g00509 3 5838090 5840967 ECH