Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00419 ATGGCACTCTCCAACGTCTTGATTCTGTGTGTATTCTTAGCAATCAACATGGCCGTGCCGGCGCTGGCTAAGGTCTACTCCGTTGGAGACTCGTCTGGTTGGGCGATCGGCGCTGACTATGGCACCTGGGCTAGCGGCAAAACCTTCCAAGTCGGTGATTCTCTCGTGTTTAACTATGGAGCGGGACATACAGTGGACGAAGTTAAAGAGAGTGACTACAAATCGTGCACCACCGGTAATTCAATTTCTACCGACAGCAGTGGAGCCACCACCATTACTCTCAAGACCGCCGGAACCCACTACTTCATATGTGCCGTTCCTGGACATTGTAGTGGTGGCATGAAGCTCTCTGTTGATGTTAAGGCCGGAAAAGCCTCAGCTCCCTCTGCGACGCCTTCCTCCGGGAAGGGCTCGCCTGCCGGTGATACCCCAACCACCACCACCACCACTCCATCGACGGCACATTCGACTTCTTCGGCAGCTGGCCTTTCGCCTGTTGTCGCTATGCTGACTGTTTCTTGGGTTTCATACTTACGCCTGCTATGA 546 0.5385 MALSNVLILCVFLAINMAVPALAKVYSVGDSSGWAIGADYGTWASGKTFQVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSISTDSSGATTITLKTAGTHYFICAVPGHCSGGMKLSVDVKAGKASAPSATPSSGKGSPAGDTPTTTTTTPSTAHSTSSAAGLSPVVAMLTVSWVSYLRLL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00419 181 PANTHER BLUE COPPER PROTEIN 23 140 IPR039391 GO:0009055
Accr3g00419 181 Gene3D - 22 127 IPR008972 -
Accr3g00419 181 MobiDBLite consensus disorder prediction 125 159 - -
Accr3g00419 181 CDD Phytocyanin 24 120 - -
Accr3g00419 181 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Accr3g00419 181 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Accr3g00419 181 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Accr3g00419 181 FunFam Blue copper 22 126 - -
Accr3g00419 181 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Accr3g00419 181 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00419 Accr-Chr3 4658283 4658924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00419 7 126 Miscellaneous Gene Families AT1G22480 54.167 1.18e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00419 - - vvo:131660963 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00419 3 4658283 4658924 Accr3g00419 3 4658283 4658924 ECH