Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00384 ATGTTCAACAACGCATCAGAGAAAAATAAGAGCAACGCAGAAAACAACAACATGAAGAGAGATGAAGTGTTTGAAACGTGGTGGAATGGATTTCAAAACACATCATATCCCAATCTTCATCTTGTCCATCGTTGCAATGAGCATTTGGCGACTAACTCCCCTCTATGGAGTGTCTCTCACTCATCACATTCTCCTCCGTCAACTTCTTTCGCCGAGGGGCTTCATGTTTCTCCCCGTAGTTCCTTATACTCAGCTTCATCTCAGGACAGGCAGCATCTAACACCCTACGATCACCACTCAACTAATTTTTTGCTGGAGTCAGAGACATCGGATTTCCATATTCGGAATAGCATCATTGATAATCAAGTGGTTGATCTGGGCCTGTCTGAGGATTTCTATAGAATGAATTTTATGGATGGACAGGGAAATGGTAACAGAACAAAGGCAACTGAAGCTGATTCCTACGGATTTGGATTTAACGCTTTTCCTTTCGATATAAATATTCCCGGCGTTGGTGAAACACGGAGCTCCTATGAAGATTGTTGCAATGAAGTTTCCGCACCTAATAATGGCTGTATCCCATCGTCTACTTGGGGAGTTTCACCAAGTATGGTTGCTGGTATGAAGTGGGCTAACTATACCTCGGAGAAAGGATACACTTCTTCCCTCGCACATGGTCAATCCAGCGCTTCGAATTTTTGCTCTGGTTGGAACATGAACCAAACATATCCTCAATTGGAGCACATCAAGAAACAGGGGAGCAGTAGCTCTGATGGAGAAGTTCAACAGCAGAAGCCGTCTATCATCAACCCCTTCCCTTGTGATGCTATAACTAGAACACGACTTTGTGGGGTGGATTATGATGGAAGTAGGAGTGTCGAAAACCATTTAAGATTCTCTCAGATTATGCACCCCATGCTAGCTTCACTTCTGGATACAAACGAAAGAACAAGGGGAATTGCTAACTTTGAGCTGCCTGAATTTCTCTCGTCCGAAAGAGCTGTTGGCGATCCAGTGGCGTTTCGATGTGATAATAGTTTTATCATGCAAGGAAAAGATTTAAATTATTGCATAGACAAGGGATACAATTCTTTGAGGGTTAACCAAAAGAGTTCCCTCAATGAGAGTGCATTTGCAAGCGCAACTGCAGGGGAGAAAGCTTCTAGAGGCAATTATTATACTCCTGGCAGTCAATTTTGTAAGAATAACGGCAGTCTTGTTGGTGATTTGCCACTGCACTCACCATCGAATTTCTGTTCTTTGGATGAGTGCCAAGGTTACATTAACTTTCTGGCAAAGGATCAGAACGGATGCCGCTTCCTACAAAGGATGGTTGATAAGGGGAATAAGGAGATGCTTATAGTATTTGAGGGAATAATTGATAATGTTGTTGAACTCATGATGGACCCCTTTGGTAACTATCTTGTGCAGAAGTTGCTGGATGTGTGTAGAGAAGAACAGAAGTTGCAGATTGTGTCCATGGTGACCAAAGAACCAGGGCAGCTTGTCAGAATATCTTTAAACACGCATGGCACACGGGTCATACAGAAGTTGATTGAGACGCTCAACAAGTCTAGGAAACAAATTTCATTAGTGAAGTCAGCCCTTCAAGCAGGTTTTCTTGATCTTATTAAGGATCTGAATGGAAATCATGTGATACAACGTTGCTTGGAATGCCTTAGCTGTCAAGATAATGAGTTTATTTTTTGTGCTGCCGCCAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGTTGTGTATTGCAACGTTGCATTGATCACTCAGTTGGCAGATATCGAGATAAGCTGGTCGCAGAAATATGTAGACATGCGCTTCTCCTTGCTCAAGATCCTTTTGGAAATTATGTTGTTCAGTATATAATAGAGAGGGGGATCCCCGCTCTCAGAGCCAAGCTGACTTCTCAGTTCAAAGGGAACTATGTGAAACTGTCTATGCAAAAATTTAGCAGTCATGTGGTTGAAAAATGCCTTAAGCATGTTGTAGTGAGCAGATCAAGGATCGTCCGAGAATTGCTGTCTTCACCTCACTTCGAACAGTTGTTGCAAGATCCATTTGCCAACTATGTCATTCAGTCTGCTCTTTTAGAAACAAAGGGTTCACTTCATACAACTTTAGTTGAAGCAGTTCGTCCTTACAATATCTTGCGCACCAGCCCGTTCAGCAAGAGGATTTTCTCGGGAAATCTACTCAAGAAGTAA 2223 0.4247 MFNNASEKNKSNAENNNMKRDEVFETWWNGFQNTSYPNLHLVHRCNEHLATNSPLWSVSHSSHSPPSTSFAEGLHVSPRSSLYSASSQDRQHLTPYDHHSTNFLLESETSDFHIRNSIIDNQVVDLGLSEDFYRMNFMDGQGNGNRTKATEADSYGFGFNAFPFDINIPGVGETRSSYEDCCNEVSAPNNGCIPSSTWGVSPSMVAGMKWANYTSEKGYTSSLAHGQSSASNFCSGWNMNQTYPQLEHIKKQGSSSSDGEVQQQKPSIINPFPCDAITRTRLCGVDYDGSRSVENHLRFSQIMHPMLASLLDTNERTRGIANFELPEFLSSERAVGDPVAFRCDNSFIMQGKDLNYCIDKGYNSLRVNQKSSLNESAFASATAGEKASRGNYYTPGSQFCKNNGSLVGDLPLHSPSNFCSLDECQGYINFLAKDQNGCRFLQRMVDKGNKEMLIVFEGIIDNVVELMMDPFGNYLVQKLLDVCREEQKLQIVSMVTKEPGQLVRISLNTHGTRVIQKLIETLNKSRKQISLVKSALQAGFLDLIKDLNGNHVIQRCLECLSCQDNEFIFCAAAKFCVDIATHRHGCCVLQRCIDHSVGRYRDKLVAEICRHALLLAQDPFGNYVVQYIIERGIPALRAKLTSQFKGNYVKLSMQKFSSHVVEKCLKHVVVSRSRIVRELLSSPHFEQLLQDPFANYVIQSALLETKGSLHTTLVEAVRPYNILRTSPFSKRIFSGNLLKK 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00384 740 SUPERFAMILY ARM repeat 421 733 IPR016024 -
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 535 570 IPR001313 GO:0003723
Accr3g00384 740 CDD Pumilio 422 734 IPR033712 GO:0003723
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 571 606 IPR001313 GO:0003723
Accr3g00384 740 Gene3D - 412 737 IPR011989 -
Accr3g00384 740 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 402 740 IPR033133 GO:0003723
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 494 533 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 643 677 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 458 493 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 423 457 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 535 570 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 607 642 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 680 715 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 571 606 IPR001313 GO:0003723
Accr3g00384 740 SMART pum_5 497 533 IPR001313 GO:0003723
Accr3g00384 740 FunFam Pumilio homolog 9 412 740 - -
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 462 494 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 576 609 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 501 528 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 540 569 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 611 639 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 647 679 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 431 451 IPR001313 GO:0003723
Accr3g00384 740 Pfam Pumilio-family RNA binding repeat 684 701 IPR001313 GO:0003723
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 458 493 IPR001313 GO:0003723
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 643 681 IPR001313 GO:0003723
Accr3g00384 740 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 184 733 - -
Accr3g00384 740 ProSiteProfiles Pumilio RNA-binding repeat profile. 607 642 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00384 Accr-Chr3 4260451 4265473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00384 - - pcin:129297951 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00384 3 4260451 4265473 Accr3g00384 3 4260451 4265473 ECH