Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00378 ATGGACTCCATAATGAGCAAGCTCCGTAATCTGGATGCCTATCCTAAAATCAACGAGGATTTCTACAGCCGCACCCTCTCCGGTGGCCTCGTTACTATCGCCTCCTCCGTCCTCATGCTCTTGCTTTTCATATCCGAGCTTCGATTGTATCTTCATGCAGTAACTGAGACCAAACTATTTGTAGATACTTCAAGAGGAGAGACGCTGCGGATAAATTTTGATGTTACATTTCCTGCCCTACCTTGTTCAATACTCAGTCTAGATGCCATGGACATCAGTGGAGAGCAACATCTTGATGTTAAACATGATATTGTCAAGAAAAGATTAGACTCTCATGGGAATGTAATAGAAACAAGGCAGGATGGGATTGGTGCCCCCAAGATTGATAAGCCTTTGCAAAGACATGGAGGCAGGCTTGAGCATAATGAAACATATTGTGGTTCCTGTTATGGTGCTGAAGCGACAGACGAGGATTGTTGTAATTCCTGTGAGGAAGTTCGTGAAGCTTACCGAAAAAAAGGTTGGGCGATGTCAAATCCAGATTTAATTGACCAGTGTAAAAGAGAAGGATTCTTACAAAGGATCAAGGATGAAGAGGGTGAAGGTTGCAATGTCTATGGATTCTTGGAAATAAATAAAGTGGCTGGAAATTTCCATTTTGCCCCAGGGAAGAGCTTTCAGCAATCTGGTGTCCATGTGCATGACCTGCTTGCTTTTCAAAAGGACTCATTTAATATAAGTCACCAAATTAACAGATTAGCGTTTGGAGAGTACTTCCCTGGTGTTGTGAATCCTCTTGATGGTGTGCATTGGACACAACAAACACCAAGTGGAATGTATCAGTATTTTATAAAGGTTGTGCCGACTGTATACACTGATGTGAACGGGCATACAATCCAATCAAACCAGTTCTCTGTGACAGAACACTTGAGGACTGGAGATGTGGGTCGTCTGCAGTCCCTGCCTGGTGTTTTTTTCTTCTACGACCTTTCCCCAATTAAGGTTACTTTTACTGAAGAACATATCTCATTCCTACACTTCCTCACTAACGTGTGCGCCATAGTTGGAGGTGTTTTCACGGTTTCTGGGATCCTGGATTCGTTTATCTACCATGGTCAAAAGGCGATCAAGAAGAAGATGGAAATTGGGAAATTTAACTAA 1161 0.4264 MDSIMSKLRNLDAYPKINEDFYSRTLSGGLVTIASSVLMLLLFISELRLYLHAVTETKLFVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIVKKRLDSHGNVIETRQDGIGAPKIDKPLQRHGGRLEHNETYCGSCYGAEATDEDCCNSCEEVREAYRKKGWAMSNPDLIDQCKREGFLQRIKDEEGEGCNVYGFLEINKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNISHQINRLAFGEYFPGVVNPLDGVHWTQQTPSGMYQYFIKVVPTVYTDVNGHTIQSNQFSVTEHLRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKKKMEIGKFN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00378 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
Accr3g00378 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Accr3g00378 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00378 Accr-Chr3 4159081 4166429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00378 K20367 - gmx:100782309 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00378 3 4159081 4166429 Accr3g00378 3 4159081 4166429 ECH