Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00367 ATGGCGAATACCAAATCCGATAGAAGTGAGGATGATGAGGTCTTTCAGAATGAGACCTGCAAGAGGAGAAGAATGTCATCTAGCTTTGATGCGGAGAGTCCAAGATTAATTCCAAATCTTCCTGATGAGTTATCACTTCAGATTATCGCTAGAGTTCCTAGAATTTGCTACTTCAACATGAGGTTGGTGTCAAGGAAGTGGAAGGCTACTATCATGAGTTCTGAACTATATAAATTAAGAAAAGAACTTGGAACAACTGAAGAGTGGTTATATCTGCTGATCAAGATTGGAGAAAATAAGCTTATATGGCATGCCTTAGACCCTCATTCCCAGAAATGGCAGAGACTGCCTGCTATGCCCAGTTTTGTTAATGAAGAAGAATCTAGAAAGGGTTCATCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGAATTGCTGAAGTTATAAGAGGTTTGCTGGGACAGAAGGATGCATTAGATGAAATGCCCTTTTGCGGTTGCGCCATTGGAGCTGTTGAGGGATGCCTCTATGTTCTAGGTGGATTCTCTAAATCTTCCACGATGAGATGTGTTTGGCGATATGATCTGATACAAAACACATGGATCAAGGTGACCTCTATGTCTACAGGTAGGGCATATTGCAAGACAGGCATCTTAAATAACAAGCTTTATGTGGTTGGAGGGGTTAGTCAGGGTCAAGCTGGATTGATTCCTCTTCAGTCTGCCGAAGTTTTTGATCCCTCTACAGATACATGGTCCAATGTGCCTAGTATGCCTTTCTCAAAAGCTCGAGTCCTGCCCACTGCTTTTTTGGCTGACATGTTGAAGCCTATTGCCACGGGGTTGACCTCTTACATGGGAAGGCTATGTGTCCCACAAAGTTTGTATTCATGGCCCTTTTTCGTTGATGTAGGCGGAGAAATCTATGATCCTGAAACAAATTCATGGATGGAAATGCCTAATGGGATGGGTGAGGGTTGGCCTGCTCGGCAAGCAGGCACCAAATTGAGTGTTGTGGTGGATGGTGAATTATATGCTTTTGATCCGTCTAATTCTCTGGAAAGTGGAAAGATCAAGGTATATGATCAAGGAGAAGATGCATGGAAAGTAGTTATAGGAAAAGTCCCTGTATATGATTCTGCAGATTCAGAGTCTCCATATTTGCTCGCTGGTTTCGATGGGAAAATTCATGTCATAACAAAAGATGCCAATCGTGACATTGCTGTTCTTAAGGCTGACCTGCGCAGTAATTTGGATTCTTCTCCTTCAATTTCATCTCTTTCACCCATCTGTAGCCATGAAGTTCCAGAATCAGGTGCTGAATCTGACCCGGTTGTTTGGAGGGTAGTTGCCAAGAGGGATTTTGGGCCAGCTGAATTGGTCAGTTGCCAAGTGATTGATATTTAG 1410 0.4298 MANTKSDRSEDDEVFQNETCKRRRMSSSFDAESPRLIPNLPDELSLQIIARVPRICYFNMRLVSRKWKATIMSSELYKLRKELGTTEEWLYLLIKIGENKLIWHALDPHSQKWQRLPAMPSFVNEEESRKGSSRLWMWNMVEGIRIAEVIRGLLGQKDALDEMPFCGCAIGAVEGCLYVLGGFSKSSTMRCVWRYDLIQNTWIKVTSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSNVPSMPFSKARVLPTAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWMEMPNGMGEGWPARQAGTKLSVVVDGELYAFDPSNSLESGKIKVYDQGEDAWKVVIGKVPVYDSADSESPYLLAGFDGKIHVITKDANRDIAVLKADLRSNLDSSPSISSLSPICSHEVPESGAESDPVVWRVVAKRDFGPAELVSCQVIDI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00367 469 Pfam F-box domain 38 77 IPR001810 GO:0005515
Accr3g00367 469 Gene3D - 97 380 IPR015915 GO:0005515
Accr3g00367 469 SMART fbox_2 40 80 IPR001810 GO:0005515
Accr3g00367 469 SMART kelc_smart 176 222 IPR006652 GO:0005515
Accr3g00367 469 SMART kelc_smart 223 273 IPR006652 GO:0005515
Accr3g00367 469 Pfam Kelch motif 164 209 IPR006652 GO:0005515
Accr3g00367 469 Pfam Kelch motif 212 260 IPR006652 GO:0005515
Accr3g00367 469 Gene3D - 35 90 - -
Accr3g00367 469 SUPERFAMILY F-box domain 33 114 IPR036047 GO:0005515
Accr3g00367 469 SUPERFAMILY Kelch motif 93 401 IPR015915 GO:0005515
Accr3g00367 469 PANTHER OS02G0202900 PROTEIN 21 467 IPR045887 -
Accr3g00367 469 CDD F-box_AtAFR-like 36 80 - -
Accr3g00367 469 ProSiteProfiles F-box domain profile. 34 80 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00367 Accr-Chr3 4007580 4008989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00367 40 264 Miscellaneous Gene Families AT4G33900 25.417 7.45e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00367 - - gmx:100806691 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00367 3 4007580 4008989 Accr3g00367 3 4007580 4008989 ECH