Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00323 ATGGCGAAGGATTCGAAGTTGTGTTCTCAAACAAGGCTATTGCTACTACCACTCGCGCTTTCCCTTTTCTGCTTTGCGAGTCGCCTTCTACCTCGAGTAGAGGCCGTATGGTTAAACATTCCCAGCTCCGGAACCAAGTGCGTATCTGAGGAAATCCAATCTAACGTCGTCGTCTTGGCCGATTATGTTGTGGTCGCCGATCATGCTGACGCTCAACACCTTCCTACTATTTCGGTCAAGGTAACATCTCCTTATGGAAACAATCTTCACCACAATGAAAATGTTACCCATGGTCAATTTGCATTTACAACTACGGAGAGTGGGAACTACTTGGCTTGTTTCTGGGTGGATGGTCAGCATAAAGACGGTGCTTCCACAAGTCTCAACCTTGAATGGAAAACTGGAATTTCTGCCAAGAATTGGGAGACTGTTGCGAGGAAGGAAAAGATTGAGGGTGTTGAACTTGAGCTGAGGAAACTTGAAGGGGCAGTGGAAGCCATCCATGAAAATCTGATTTATTTGAAGAATAGGGAAGCAGAGATGAGGGAAGTCAGTGAAAAAACTAATGCTAGAGTGGCTTGGTTAAGTATAATGTCTCTTGGAGTTTGCATTTCGGTTGCAGTTTTTCAGCTTTGGTACCTGAAGCGTTACTTTCAGAAGAAGAAGCTCATATAG 675 0.4459 MAKDSKLCSQTRLLLLPLALSLFCFASRLLPRVEAVWLNIPSSGTKCVSEEIQSNVVVLADYVVVADHADAQHLPTISVKVTSPYGNNLHHNENVTHGQFAFTTTESGNYLACFWVDGQHKDGASTSLNLEWKTGISAKNWETVARKEKIEGVELELRKLEGAVEAIHENLIYLKNREAEMREVSEKTNARVAWLSIMSLGVCISVAVFQLWYLKRYFQKKKLI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00323 224 Pfam emp24/gp25L/p24 family/GOLD 37 219 IPR009038 -
Accr3g00323 224 Coils Coil 150 170 - -
Accr3g00323 224 ProSiteProfiles GOLD domain profile. 45 159 IPR009038 -
Accr3g00323 224 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 11 221 IPR015720 -
Accr3g00323 224 SMART EMP24_GP25L_2 35 219 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00323 Accr-Chr3 3502663 3505365 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00323 K20352 - cave:132187496 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00323 3 3502663 3505365 Accr3g00323 3 3502663 3505365 ECH