Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00316 ATGGATGCGTCCGCGCTGCAACTCATCTCCGAAGTCGGAGCTCGTCTCAGCCAGCGAAGTCGTCCTACCAAGGATTTCATCGTCAAATCCCTGCGACAAGCTGTAAGTGCTTTGTCTCAGTTAAAACAGTTTTCCCTTATTGAAACCTCCAATGAAGCACAAGATAATAACGAGGAGGAAGTTCTCAGAAAGCAAGAAGCTGCCCAAAATCGAGTAGCTTCCTTAAAGACCCTGGAGCATGTGATCGCTAGTGATCTGCTTCAATATGCAGATAAAGACGTTAGACTTCTAGTTGCTATATGTGTTGCTGAAATTTTTAGGGTCAGGGCACCAGAACCTCCTTTTGAGGACAAAGATTTAAAGGGCGTATTTAAACTTATTGTTAGTACGTTTGCGGATCTAGCTGATACCTCGAGTCCATTCTTTTCAAAAAGGGTGAAGTTACTGGAAACTGTGGCTCAGTTAAAATGCTGTTTGATAATGCTGGATATTGACTCTGAAGATTTGGTTATCGAGATGTTCAAAATTTTCTTCTCTGTTGTAAGAGATGACCACCATGCAAGTTTGACCAATGCTATATCTTCTATAATGATAGATATATTAAACGCAGGAGCTTCTCTGAAACTCTTGGAAGTGATATTACAAAATCTTATAAAGGGCAGAAAAGATGCAACCTGTGCTGCTTCTCAACTGGCTGCATCAATCATCAGTTGTGCCGATGAGATAGAGCTGAAGCCCCTTGTTTGTTGGTTTTTAACTTCTTGTATAAATGACAGGAATGCTGTAAGCTCTGGGCTGAAAGAATCTTACCATGAAATTATATTTAAAATATTCCAATGTGCTCCTGAGATGCTTCTTGCTGTCATCCCAAGCTTGATTGGAGAGTTATTGTCTGATCAAGTTGACGTTCGGATAAAAGCTGTTAATTTGGTTGGCAAGCTTTTTACACTTCCAGAACATCATGCTGCGCAGAAATATCATGATCTTTTTATGGAATTTTTGAATAGATTTTCTGATAAGTCTGTGGACGTTAGAATTAGTGCCTTGCAATGTGCTAAAGCTATTTATGTGGCAAATACATCAGGGAGAGAATTTCATCAAATTATCCGTGCTATTGAAGATCGATTACTAGACTTTGATGACAGGGTAAGAATGCAGGCAATACTTGTTGCCTGTGATCTTTCCAAGTCAAACCTACAACTCGCACCATCCAAACTAATATCTCAAGTTACTGAAAGAATTCGGGATAAAAAGATATCTGTTAGAAAGAGGGCCTTGCAAAAGCTTATGGAAGTATATCAAGATTACTGCAAGAAGTGCTGTGAAGGCAGCATGACAACTTGTGATCACTTTGAGGAGATTCCATGTAAAATTTTGATGATTTGCTTTGATAAAGATTGTAAGGAGTTCAGTTCACACAACATGGAATTAGTTCTTGCCGATGATTTATTTCCAGAGCATCTCTCCATTGAGGAAAGGACAAATCACTGGATACACATATTTTCTCTTTTCAGTCCTCTTCATGAAAAGGCATTACATACTATTTTATCTCAGAAGAAAAGGTTGCAAAATGAGGTTAAAAACTATATGGCTTTGCGGAAGCAATTGAAGGAAAATTGGTCCGAAGATTTACAGACAGCTACTGCAAATATGTTCACTAAAATTGCCTCATTTTTTCCAGATCCTTCTAAAGCAGAAGAGTGGTTACTTAAAGTAAACCAGCTTAAAGATAATAATCTATTTAACTCACTCGAACAATTGTTGGAGGAGCAGACTTTTACAACCAGAAAAATCATCCAAGATAAGCTTATGAAAATGGTTGGGGAGAGCAATCCATATTTTGAGTTTCTACGCTCACTCTTCTCTAAATGTTCGTACAACATTTTCAGCTCAGAGCACGTACACTACATTTTAGATTATCTTTCCAATTCCACAGTCGGAAGCAAACGCTTGAAGGATTCTTCTATAAAGCTTCTCCTGGCCATTGCGAGAACTTTTCCTTCAATCCTGAAAGACTCCGAAAAGCAGTTCCAAATGCTGTTGGAGCAGAAGAGCGAATTTAGTGACAAGTTGATTGAGGTTTTAGCAAAAGCGGGCTCTCACATTTCGATCAAACTCAGTGATATTTACCCATTTCTTCAAAGAATGTGCTTGGAGGGAACTCGCACACAGGCTAAATTTGCGATCTCGGCAATGGCTGCTTTGAGTTCTGACCAATCATTTTTCTCAGATCTATACAAGGAACTTGCTGTTTCTCTTTATAGCCAGCGCAATGTTCCAACAGTTTTGCAGTCTTTGGGATGCATTGCACAATGCTCTATGTCAGGAACTTTTGATACTCGCGATGAGGAAATTACTTCATATATTTCTCATAGGATTATTCAAGCGGTGCCCTGGGATGACGTTCACAATGCATCATCCTGCCAATTGAAGATTTATGGGCTAAAAGCACTCGTAAAGAGTTATCTGCCAGAGCAAGGGAACTGTGCGAGACGGAATATTATTGGTTTGTTGGACATTTTATTTAGAATGTTGCAGCAGAGCGATCACTTTGTCGGTTTGAATTCTAGTGAAAGTGATGGGCCTTGTATCAGATTAGCTGCTGCAAAGTCAATTCTGCGGCTGTCTAGGAGGTGGGATCAGCATATTTCTCCCGAGATTTTTCGCTTCACCATTTCGATTGCAAAGGACTCGTCATCTTCTATTAGGAGATCATTTCTAAATAAAGTATATAAAATGCTGAAGGAGCGTAGACTACCGATAAGATATGCATGCGCTTTTCCATTGGCCGTGATGGAAGGGACTGAGGATCTTCAATGTTATAAAACTAAATTTTTGGCAGAATTTATCAAGGATTACAGTATAGTAGCTCGTACACAGCAAGTTTCTTTTGTGCAAGGAGCAGTTTTTTGTTATCCAGCATACGTTGTAGTCTTTCTGATTCATGTACTTTCTCGTGATACTGGCTTTCCATCTGAAGGCTGTCAAGATGAACAATTGTTTGCTGACATTTGTAGTCCACTCTATATTTTTATGCAGGCATTAGTCAATTCAAGTATTGTTGGTGGAGGCCAGGACCTTGTAAATGATGCTGTATTATATCTGTTTAGTATTTTACGAGCTATCAGAAAAGCTGAGGATGCTGTCGATGTGCAGATGACTACTAAGCTGCATATGCTGGCTGACATTGGCATATTTATTTTAAATGCACTAAAACACGGTGAAATTTCTGCATCACAAGCCCCAGGACAAATTCTGCTGCCTTCATCGTTATATAAAATGAGTTTTGCCAAGAACAATGCTAATCCCAGAAAGTCCTATTTTGATGAATGCTTTCTGAGTGGCGTCTTGCAAAAACTTAGATCATACGTCCCTCAGGCATGTGTTCAAAAGCCTCTTAGAATTCTTAAAAATGGTCGCAAGTGTCAAGAGGATGTTCCAAAGTGCAATCTTAACACATACATTACATCCAATTTGGCATCTAGCAAACCAGATGATTTGTTGTGGAGGGAAACGACACGTGTGAAATCCGTAAGGCCTAATATCCCTTCAGGGAAAAGGAGGGAAAATGCTGTGTCTTCCACCACCTCCGGGCCAGTTGGTTTGCACGAGTGTTCCACTATTCATAGGCAACAGAATATTACTTCTGAACCTTGTGAAAGAACGCTGGAAGGGAACCAACATTCCTCCTGTGATTCTGTGAGTTCTCTGGTTGAATTGCATGTTTCAACCCGCAAGTCAAAAAGGATCGCTGCTTCTTTGATAGAGAATGCTGTGAGAAGCGGAAAATATGCTGCTCAACCTTCCAAGCGCCCCAAAACCGACCTCAATGATTCTTGTGGCACAAAGAAGGAAGATGTACTGACAGACCTTTCAAATCAATGTCACTTATGGCACTGTGAACCCGAGAAACATTCTTACCTTGGTGGGGTAAAGAAAACTAAGGCAACAACAGGAAGCAAAATAACCAACAAGGGAACATCACTTAACCAAGAAAATGCAAATGAGAATGGAAGGGGAAGATCTACGGGGACTTCAGAATCAGAAGTTGTAAATACAAATGAAAAGGCTACGAGTCATTTGGTATCACGGTCAAGGCGAAAAAGGATGGACTACGATTTTTGA 4125 0.3993 MDASALQLISEVGARLSQRSRPTKDFIVKSLRQAVSALSQLKQFSLIETSNEAQDNNEEEVLRKQEAAQNRVASLKTLEHVIASDLLQYADKDVRLLVAICVAEIFRVRAPEPPFEDKDLKGVFKLIVSTFADLADTSSPFFSKRVKLLETVAQLKCCLIMLDIDSEDLVIEMFKIFFSVVRDDHHASLTNAISSIMIDILNAGASLKLLEVILQNLIKGRKDATCAASQLAASIISCADEIELKPLVCWFLTSCINDRNAVSSGLKESYHEIIFKIFQCAPEMLLAVIPSLIGELLSDQVDVRIKAVNLVGKLFTLPEHHAAQKYHDLFMEFLNRFSDKSVDVRISALQCAKAIYVANTSGREFHQIIRAIEDRLLDFDDRVRMQAILVACDLSKSNLQLAPSKLISQVTERIRDKKISVRKRALQKLMEVYQDYCKKCCEGSMTTCDHFEEIPCKILMICFDKDCKEFSSHNMELVLADDLFPEHLSIEERTNHWIHIFSLFSPLHEKALHTILSQKKRLQNEVKNYMALRKQLKENWSEDLQTATANMFTKIASFFPDPSKAEEWLLKVNQLKDNNLFNSLEQLLEEQTFTTRKIIQDKLMKMVGESNPYFEFLRSLFSKCSYNIFSSEHVHYILDYLSNSTVGSKRLKDSSIKLLLAIARTFPSILKDSEKQFQMLLEQKSEFSDKLIEVLAKAGSHISIKLSDIYPFLQRMCLEGTRTQAKFAISAMAALSSDQSFFSDLYKELAVSLYSQRNVPTVLQSLGCIAQCSMSGTFDTRDEEITSYISHRIIQAVPWDDVHNASSCQLKIYGLKALVKSYLPEQGNCARRNIIGLLDILFRMLQQSDHFVGLNSSESDGPCIRLAAAKSILRLSRRWDQHISPEIFRFTISIAKDSSSSIRRSFLNKVYKMLKERRLPIRYACAFPLAVMEGTEDLQCYKTKFLAEFIKDYSIVARTQQVSFVQGAVFCYPAYVVVFLIHVLSRDTGFPSEGCQDEQLFADICSPLYIFMQALVNSSIVGGGQDLVNDAVLYLFSILRAIRKAEDAVDVQMTTKLHMLADIGIFILNALKHGEISASQAPGQILLPSSLYKMSFAKNNANPRKSYFDECFLSGVLQKLRSYVPQACVQKPLRILKNGRKCQEDVPKCNLNTYITSNLASSKPDDLLWRETTRVKSVRPNIPSGKRRENAVSSTTSGPVGLHECSTIHRQQNITSEPCERTLEGNQHSSCDSVSSLVELHVSTRKSKRIAASLIENAVRSGKYAAQPSKRPKTDLNDSCGTKKEDVLTDLSNQCHLWHCEPEKHSYLGGVKKTKATTGSKITNKGTSLNQENANENGRGRSTGTSESEVVNTNEKATSHLVSRSRRKRMDYDF 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00316 1374 Pfam Sister chromatid cohesion protein PDS5 protein 25 1093 - -
Accr3g00316 1374 Coils Coil 519 539 - -
Accr3g00316 1374 CDD PDS5 27 667 - -
Accr3g00316 1374 MobiDBLite consensus disorder prediction 1360 1374 - -
Accr3g00316 1374 Gene3D - 267 453 IPR011989 -
Accr3g00316 1374 MobiDBLite consensus disorder prediction 1182 1202 - -
Accr3g00316 1374 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 4 1316 IPR039776 GO:0007064
Accr3g00316 1374 Coils Coil 670 690 - -
Accr3g00316 1374 MobiDBLite consensus disorder prediction 1187 1202 - -
Accr3g00316 1374 MobiDBLite consensus disorder prediction 1318 1359 - -
Accr3g00316 1374 MobiDBLite consensus disorder prediction 1318 1374 - -
Accr3g00316 1374 Coils Coil 50 70 - -
Accr3g00316 1374 SUPERFAMILY ARM repeat 68 914 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00316 Accr-Chr3 3429046 3446169 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00316 K11267 - gmx:100777822 1539.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00316 3 3429046 3446169 Accr3g00316 3 3429046 3446169 ECH