Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00294 ATGGACGTGAAATGCAGGGGAATCGCAATGACTCTCCTGTTCTTTCTGGGATTTTCTGCTATTTTCCCCCTCTGTTTCTCCGATGTCAATCTGCCCAGTCTCACCCACAAGCTACTACCATTAATTTCTAAAAATCGCATTGGCTCCTCCGTTGTTTTTCCGGTTCAAGGGAACGTGTATCCCCTCGGGTATTACTCAGTTTCCTTGAACATTGGCAATCCCCCAAAAGCTTACGACCTTGACGTTGACTCCGGCAGCGATCTCACCTGGGTACAGTGCAACGCACCGTGTAAAGGTTGCACCAAGCCTCCGAGTCAGCAGTATAGACCGAACAAGAACCTTGTTCCTTGTGGGGACCAGTTGTGTGGTGGAGTTCAGTCATCGCCGAGCCATCACTGTCAATCCCCCAATGACCAATGCGACTATGAGGTCGAGTATGCAGACCACGGCTCATCCATGGGTGTGCTGGTCCGAGACGTTATTCCTCTCCGTCTCACCAATGGGTCGGTTCTCGGTCCCCGGTTGGCTTTCGGGTGTGGGTACGATCAAACCTATTCTGGTCCAACCTCACCACCATCAGCAGGAGTGCTAGGTCTTGGAAATGGCAAGTCAGGCCTTCTGTCACAGCTTACATCGATGGGTCTCATTCGTAATGTGGTGGGCCACTGTCTAAGTGGTCGTGGCGGAGGTTTTTTATTTTTTGGAGATCATCTCGTTCCCTCCTCTGGGGTTTCTTGGACCCCAATCTTGCCTGGTTCCTCTGTAAAACACTACGTCTCTGGACCAGCGGATCTGCTTTTCAATGCAAAGCCAACTTCTGTGAAGGGCCTTCAGGTTATCTTTGACAGTGGAAGCTCCTACACATACTTCAATTCCAATGCTTATCAAGCCATTCTTAATACGATCGTTGGTGATTTGAAGGGGAAGCAATTGAGCGGAGCAACAACAGATCATTCCCTTCCAGTTTGTTGGAAAGGTACAAAGCCATTCAAATCTTTGAGAGATGTGGCCAACCTTTTTAAGCCCTTAACACTGAGCTTCACAAGGACAAAGAATGTACAGCTGCAATTGCCACCATCGTCTTATCTCATTCTTACTAAATATGGCAATGTTTGCTTGGGAATTCTTAATGGCTCTGGAGCTGGACTGGGAAATCTTAACATCATTGGAGACATATCTTTACAAGATAAAATGGTGATTTATGACAACGAGAAAAGGCAGATTGGGTGGACTCCCGCAAACTGTGATAGGCATCCCAAGTGA 1263 0.4782 MDVKCRGIAMTLLFFLGFSAIFPLCFSDVNLPSLTHKLLPLISKNRIGSSVVFPVQGNVYPLGYYSVSLNIGNPPKAYDLDVDSGSDLTWVQCNAPCKGCTKPPSQQYRPNKNLVPCGDQLCGGVQSSPSHHCQSPNDQCDYEVEYADHGSSMGVLVRDVIPLRLTNGSVLGPRLAFGCGYDQTYSGPTSPPSAGVLGLGNGKSGLLSQLTSMGLIRNVVGHCLSGRGGGFLFFGDHLVPSSGVSWTPILPGSSVKHYVSGPADLLFNAKPTSVKGLQVIFDSGSSYTYFNSNAYQAILNTIVGDLKGKQLSGATTDHSLPVCWKGTKPFKSLRDVANLFKPLTLSFTRTKNVQLQLPPSSYLILTKYGNVCLGILNGSGAGLGNLNIIGDISLQDKMVIYDNEKRQIGWTPANCDRHPK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00294 420 Pfam Xylanase inhibitor C-terminal 275 411 IPR032799 -
Accr3g00294 420 PRINTS Pepsin (A1) aspartic protease family signature 387 402 IPR001461 GO:0004190|GO:0006508
Accr3g00294 420 PRINTS Pepsin (A1) aspartic protease family signature 71 91 IPR001461 GO:0004190|GO:0006508
Accr3g00294 420 PRINTS Pepsin (A1) aspartic protease family signature 279 290 IPR001461 GO:0004190|GO:0006508
Accr3g00294 420 FunFam Aspartyl protease family protein 42 236 - -
Accr3g00294 420 Pfam Xylanase inhibitor N-terminal 65 236 IPR032861 -
Accr3g00294 420 Gene3D Acid Proteases 43 236 IPR021109 -
Accr3g00294 420 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 80 91 IPR001969 GO:0004190|GO:0006508
Accr3g00294 420 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 279 290 IPR001969 GO:0004190|GO:0006508
Accr3g00294 420 Gene3D Acid Proteases 237 418 IPR021109 -
Accr3g00294 420 FunFam Aspartic proteinase Asp1 isoform A 240 419 - -
Accr3g00294 420 SUPERFAMILY Acid proteases 57 418 IPR021109 -
Accr3g00294 420 ProSiteProfiles Peptidase family A1 domain profile. 65 411 IPR033121 -
Accr3g00294 420 PANTHER ASPARTYL PROTEASES 52 409 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00294 Accr-Chr3 3205929 3208067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00294 49 420 Miscellaneous Gene Families AT1G44130 62.032 5.05e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00294 - - qsa:O6P43_019772 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00294 3 3205929 3208067 Accr3g00294 3 3205929 3208067 ECH