Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00289 ATGCCAGCTTCCCCTTCTGACAACCGAACCAAATGGCGGAAGCGCAAGAGAGAACCCCAAATCAGCCGGCGGCAACAGAAGCACGAGGACGAGGACGAGGACGACGAAGACCCCATTGGCGAGGATGACCACCTCGAGCGACAGGATGATTCCGAGGACCAAACCCAACACCCTAATCCCCAATCCGGTTCTAATTCTCAAGCGCAGCTCGAGATCGAGGTTTTGTCCGACGAAGGGGTCCAAATTTCTCAGTTCCCTAGAGTGATCAAGCGCACTGTCAATCGGCCTCACGCATCCGTCACGGCAATTGTTGCTCTGGAGCGTGCCAATGAGTCTGGAGACAACAAGGGTCAGTTGCAGAATTCTCCATTTTTGGAGAATGTGTCGCACGGGCAGCTTCAGGCGCTTTCCACCGTGCCGGCTGATAGTTCAGCTTTGGATCAGGACCGTAATTCGGCTTATGTGATCACCCCACCTCCCGTACTGGAAGGCCGTGGTGTTGTCAAGCGGTTTGGGAGTAGGGTTCTGGTAGTTCCAATGCACTCAGAATGGTTTTCACCAGCTACAGTTCATCGGCTCGAGAGACAAGTGGTGCCACGTTTTTTCTCTGGAAAATCACCGGATCATACCCCAGAGAAGTACATGGAATGTAGAAATTATATAGTTGCAAGATACATGGAAGACCTGAGGAAGAGGATTACAATTTCTGATTGCCAAGGATTGCTAGTTGGGGTTGATAATGAAGATTTAACTCGAATTTTCCGGTTCCTTGATCATTGGGGAATCATCAACTACTGTTCTCAGGTACCAAGTCATGAGCCTCGGAATGACGAGTGTTACCTGAAGGATGAGGCAAGTGGTGAGATTCGTGTGCCATCAGATGCCTTAAAATCTATAGATGGTTTGATCAAATTTGACAGGCCGAAGTCTAAACTCAAAGGTGATGAAGTTTATTCATCATTGACGACTCAGAATGCTGATATTTCTGATTTGGAGGAAAGAATAAGAGAGCATCTATCTGAAAATCATTGCAATTGTTGTTCTCGTCCTCTTCCTGCTGTTTTCTATCAGTCACAAAAAGAGGCTGATATTCTTCTCTGCATTGATTGTTTCTATGATGGGAGATTTGTCGCTGGTCATTCAAGTATAGATTTTATAAGAGTTGATTCAACAAGAGATTATGGTGATCTAGATGGGGATAGTTGGACTGATCAAGAAACCTTGCTGCTGCTTGAGGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGTATTCTCCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGAATGTCATTGTCATCAAATATGTCAAATGGCAATGATTGTGAAAGACCTCGTTCAAATTCAGATGCAGATTTAGCAGGACCGACTCAGAGCATTGATCCCAACAGCAGGCTCCCTTTTTCAAATTCTGAAAATCCTGTTATGGCTCTGGTTGCCTTTTTGGCCTCCGCTATCGGACCTAGAGTAGCTGCTGCTTGTGCACATGCAGCATTAGCAGAATTGTCGGAGAATAATTCTGGTAGCACGTCACAGAAAGAAGCACCAGGGCAAAGTAGCAGGATGAACTTGGAAAGCGCACATAGTAAAGATGGCAGTCTTCTTGGAGAAATTGTGAACCCAAATCAGCAAGATGAGGACGAGGCAAAAGCCCTTGGTTCACAGGGCCCAAATGAGGGTGAGGCCATCCCCCTATCTGCTGAGAAAGTTAAAGATGCTGCCAAGGCAGGCTTGTCTGCTGCAGCAATGAAAGCTAAACTATTTGCAGATCATGAAGAAAGAGAAATTCAGAGGCATTGTGCTAATATTATAAACCATCAGCTGAAAAGATTGGAATTGAAGCTCAAGCAGTTTGCTGAAATTGAAACGCAGTTGATGAAGGAATGTGACCAAATGGAGAAGACAAGACAAAGGCTTGCTGCAGAACGTTCCCGTCTTTTATCAGCATGGCTTGGATCTGGTGTAGCCACAAACACACCCGGTGTTGGTCCTTCTACAGTCAACAACAACAATGGCAACAGTAGACCACAAATGGCCTTTGGATCTCCTTCGCAGCCTAGTGTCTCAGGGTACCCAAGTGGCCAACCAGTTCATCAACACATGTCCTTTGTCCCACGGCCTTCCATGTTTGGTGGGTTAGGGCAAAGGTTACCACTTTCTATGATACAACAACCACAATCAACTTCTACAAATCCCATGTTTAAAGCCCCCGGTAATGTGCAGCCTTCTACCAATCATCCATTGTTGAGGCCTGTATCAGGTACTAACTCTGGTTTAGGTTAA 2367 0.4559 MPASPSDNRTKWRKRKREPQISRRQQKHEDEDEDDEDPIGEDDHLERQDDSEDQTQHPNPQSGSNSQAQLEIEVLSDEGVQISQFPRVIKRTVNRPHASVTAIVALERANESGDNKGQLQNSPFLENVSHGQLQALSTVPADSSALDQDRNSAYVITPPPVLEGRGVVKRFGSRVLVVPMHSEWFSPATVHRLERQVVPRFFSGKSPDHTPEKYMECRNYIVARYMEDLRKRITISDCQGLLVGVDNEDLTRIFRFLDHWGIINYCSQVPSHEPRNDECYLKDEASGEIRVPSDALKSIDGLIKFDRPKSKLKGDEVYSSLTTQNADISDLEERIREHLSENHCNCCSRPLPAVFYQSQKEADILLCIDCFYDGRFVAGHSSIDFIRVDSTRDYGDLDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPRMSLSSNMSNGNDCERPRSNSDADLAGPTQSIDPNSRLPFSNSENPVMALVAFLASAIGPRVAAACAHAALAELSENNSGSTSQKEAPGQSSRMNLESAHSKDGSLLGEIVNPNQQDEDEAKALGSQGPNEGEAIPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRHCANIINHQLKRLELKLKQFAEIETQLMKECDQMEKTRQRLAAERSRLLSAWLGSGVATNTPGVGPSTVNNNNGNSRPQMAFGSPSQPSVSGYPSGQPVHQHMSFVPRPSMFGGLGQRLPLSMIQQPQSTSTNPMFKAPGNVQPSTNHPLLRPVSGTNSGLG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00289 788 MobiDBLite consensus disorder prediction 479 495 - -
Accr3g00289 788 ProSiteProfiles SWIRM domain profile. 176 274 IPR007526 GO:0005515
Accr3g00289 788 FunFam SWI/SNF complex subunit SMARCC2 isoform c 182 270 - -
Accr3g00289 788 CDD SANT 401 443 IPR001005 -
Accr3g00289 788 MobiDBLite consensus disorder prediction 461 495 - -
Accr3g00289 788 Gene3D - 182 269 IPR036388 -
Accr3g00289 788 MobiDBLite consensus disorder prediction 31 48 - -
Accr3g00289 788 SUPERFAMILY Homeodomain-like 399 452 IPR009057 -
Accr3g00289 788 ProSiteProfiles SANT domain profile. 397 448 IPR017884 -
Accr3g00289 788 MobiDBLite consensus disorder prediction 531 555 - -
Accr3g00289 788 MobiDBLite consensus disorder prediction 531 566 - -
Accr3g00289 788 SMART sant 398 446 IPR001005 -
Accr3g00289 788 MobiDBLite consensus disorder prediction 1 67 - -
Accr3g00289 788 MobiDBLite consensus disorder prediction 751 788 - -
Accr3g00289 788 Gene3D - 398 448 - -
Accr3g00289 788 ProSiteProfiles Myb-like domain profile. 394 444 IPR001005 -
Accr3g00289 788 PANTHER SWI/SNF COMPLEX-RELATED 69 674 - -
Accr3g00289 788 ProSiteProfiles Zinc finger ZZ-type profile. 338 393 IPR000433 GO:0008270
Accr3g00289 788 SUPERFAMILY Homeodomain-like 175 266 IPR009057 -
Accr3g00289 788 Pfam SWIRM domain 179 265 IPR007526 GO:0005515
Accr3g00289 788 Coils Coil 636 677 - -
Accr3g00289 788 Pfam Myb-like DNA-binding domain 401 443 IPR001005 -
Accr3g00289 788 Coils Coil 321 341 - -
Accr3g00289 788 FunFam SWI/SNF complex subunit SMARCC2 isoform C 398 448 - -
Accr3g00289 788 MobiDBLite consensus disorder prediction 685 724 - -
Accr3g00289 788 Pfam SWIRM-associated region 1 604 674 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00289 Accr-Chr3 3149398 3154898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00289 344 440 EF-hand Containing Proteins AT3G07740 33.019 5.90e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00289 K11649 - gmx:100780440 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00289 3 3149398 3154898 Accr3g00289 3 3149398 3154898 ECH