Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00271 ATGAAAGTGACGTGGAAGAACAGCAAGAAACGCTCTTTGCCGGCGGTCTCCAACTTCAGTAACCTTCCTTTTGAGCATCAACACGAGGATCCGACTCCTCATCAAGACCGTGATCGTTTGCCCAACCATAAAGACGCCGAAATCGGTGCTCGTAACTCTGACCAATCCGACGACCAAGGTAGCTCCCACCACTCCGACTTATCCGAAGCAAGACGTCTGGCCAAAGAATTTCAAGCTCAGGGAGACAAGCTTGCTGAGGATGGGAAGTACGGGGAAGCGTTAGGTAAATGGGAGTCTGCTCTGTCATTGACACCCGAAGTTGCGGTTTTGCATGAACAGAAGGCCCAAGTTCTACTGGAAATTGGAGATCCTTGGAATGCTTTGAAGGCTGCAATGCGAGCTACGGAATTGCAGCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGGGCTCAGCTAAATTTTGGCGAGCCTGATTGTGCTATTGAGAGCTTTGACAGGGCCGTATCTATCAAGCCTGATTGCACGGATGCGCAAGAAGACAGAAAAACTGCATTACATCTCGTAAAGAAGAGAAAGCAACTCCACTCTACAGGCTTGAGTAATACTAAAAATCGTTATGCGGTGGGTCATAAAGATGAAAGCGCCTGA 651 0.4916 MKVTWKNSKKRSLPAVSNFSNLPFEHQHEDPTPHQDRDRLPNHKDAEIGARNSDQSDDQGSSHHSDLSEARRLAKEFQAQGDKLAEDGKYGEALGKWESALSLTPEVAVLHEQKAQVLLEIGDPWNALKAAMRATELQPSWAEAWVTLGRAQLNFGEPDCAIESFDRAVSIKPDCTDAQEDRKTALHLVKKRKQLHSTGLSNTKNRYAVGHKDESA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00271 216 Coils Coil 67 87 - -
Accr3g00271 216 SMART tpr_5 108 141 IPR019734 GO:0005515
Accr3g00271 216 SMART tpr_5 74 107 IPR019734 GO:0005515
Accr3g00271 216 SMART tpr_5 142 175 IPR019734 GO:0005515
Accr3g00271 216 MobiDBLite consensus disorder prediction 196 216 - -
Accr3g00271 216 Gene3D Tetratricopeptide repeat domain 64 210 IPR011990 GO:0005515
Accr3g00271 216 SUPERFAMILY TPR-like 73 193 IPR011990 GO:0005515
Accr3g00271 216 Pfam Tetratricopeptide repeat 142 175 IPR019734 GO:0005515
Accr3g00271 216 ProSiteProfiles TPR repeat profile. 142 175 IPR019734 GO:0005515
Accr3g00271 216 PANTHER OSMOSIS RESPONSIVE FACTOR 1 215 - -
Accr3g00271 216 MobiDBLite consensus disorder prediction 27 72 - -
Accr3g00271 216 ProSiteProfiles TPR repeat region circular profile. 142 174 - -
Accr3g00271 216 MobiDBLite consensus disorder prediction 1 72 - -
Accr3g00271 216 MobiDBLite consensus disorder prediction 10 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00271 86 211 Glycosyltransferase AT3G04240 24.113 2.09e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00271 - - pcin:129301673 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00271 3 2944398 2946853 Accr3g00271 3 2944398 2946853 ECH