Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00261 ATGGTGAAGGACACAGAGTATTATGACATCCTGGGGGTTAGTCCCTCTGCTTCCGAGGTCGAAATTCGAAAGGCTTATTACCACAAGGCAATGCGAGTTCATCCGGACAAGAACCCAAACGATCCTCAGGCTGCCCAAAAATTTCAGGTTTTGGGCGAAGCTTATCAAATTTTAAGCGATCCAGTGCAGAGGAACGCATACAATCAAAATGGAAAACATTCCGTGTCTAGGGAAACTATGCTTGATCCCATGGCTGTCTTTGCCCTGCTTTTTGGAAGTGAATTATTTGAAGACTACGTAGGGCATCTATCTGCAGCATCAATGAATTCTTCCGGAATGGCTGATGAAAGTGAATATCCGGATAAAATACATGAAAAGTTGAAGGCTGTCCAAAGAGAAAGGGAAGAAAAACTAGCAAGTTTTTTAAAAGACTTTTTAGATCAATATGTCCTTGGTGATGAAAAGGGGTTCTTGCAGCGAGCAGAATCTGAAGCCAAACGACTTTCTAATGCAGATTTTGGACTTGATATGTTACACACCATCGGCTATATTTATTCAAGACAGGCAGCACTGGAATTAGGGAAAAAGACCATCTATCTTGGAGTGCCTTTTTTGGCTGAATGGGTTCGACACAAAGGACATTTCTGGAAATCACAATTCACTGCTGCTAAAGGCGCATTTCAGCTGCTTCAGCTTCAAGAAGAGATGCACAAGCAATTTAAAATGGATAGCAGTGGCCCTGAAAATGATGTTGAATCTCATATTCGCCTTAATAAGGATACACTCATGAATTCTCTATGGAAGTTGAACGTAGTAGACATAGAAGTGACCCTGGCGCATGTCTGTCAAATGGTCCTAAGGGAAAATAACGTTAAGAGAGAAGAACTCAAAGCCCGTGCTAACGCTCTCAAGATTCTTGGGAAGTTATTTCAGGAAAAGAATTCAAAAAGAGGAGGAGGATCGAAGAAGAAAATAGCGGCAGATTCAGATGATGAAGGAAGCAGTTCAGATTCTTCAGAGGATGATGAATCACCAAGAGCAGTTTCCTACCGAACGCCCTTTTTCACTCAGGGTATAGGTAGGCTGTTCAAATGCCTGTGTAATCCAGCATTTGATGTGGACGACGAAGAGATAGTTTACAGAAGCAAATGA 1152 0.4193 MVKDTEYYDILGVSPSASEVEIRKAYYHKAMRVHPDKNPNDPQAAQKFQVLGEAYQILSDPVQRNAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLSAASMNSSGMADESEYPDKIHEKLKAVQREREEKLASFLKDFLDQYVLGDEKGFLQRAESEAKRLSNADFGLDMLHTIGYIYSRQAALELGKKTIYLGVPFLAEWVRHKGHFWKSQFTAAKGAFQLLQLQEEMHKQFKMDSSGPENDVESHIRLNKDTLMNSLWKLNVVDIEVTLAHVCQMVLRENNVKREELKARANALKILGKLFQEKNSKRGGGSKKKIAADSDDEGSSSDSSEDDESPRAVSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYRSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00261 383 CDD DnaJ 6 60 IPR001623 -
Accr3g00261 383 Gene3D DnaJ domain 1 85 IPR036869 -
Accr3g00261 383 SMART dnaj_3 5 63 IPR001623 -
Accr3g00261 383 SUPERFAMILY Chaperone J-domain 2 100 IPR036869 -
Accr3g00261 383 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Accr3g00261 383 MobiDBLite consensus disorder prediction 315 331 - -
Accr3g00261 383 Pfam X-domain of DnaJ-containing 131 320 IPR026894 -
Accr3g00261 383 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Accr3g00261 383 PRINTS DnaJ domain signature 43 63 IPR001623 -
Accr3g00261 383 PRINTS DnaJ domain signature 26 41 IPR001623 -
Accr3g00261 383 PRINTS DnaJ domain signature 8 26 IPR001623 -
Accr3g00261 383 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 335 - -
Accr3g00261 383 MobiDBLite consensus disorder prediction 315 349 - -
Accr3g00261 383 Pfam DnaJ domain 6 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00261 Accr-Chr3 2751066 2754058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00261 7 81 Miscellaneous Gene Families AT1G16680 38.462 2.41e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00261 - - gmx:100793811 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00261 3 2751066 2754058 Accr3g00261 3 2751066 2754058 ECH