Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00249 ATGCAGAGTTGCGGCTACCTCACCCCCCAACCATGGGCGCCGACCACCCTATATCGCACAAACCGCCACCCCCGATTACCAACCCAGGCCCCCAGGATCCGATTACCGCCGTCCACCTCCGCCGTGGCCGACCCTGTCAAAAATCGAAAGGCCCACTCAATGCCGCCGGAGAAGGCCGAAGTATTCAAGTCCCTCGAACCCTGGGCTTCGGAGGGGCTTCTGCCACTGCTGAAGCCGGTGGAGCAGAGCTGGCAGCCACATAACTTCGTGCCCGACTCATCGTTGCCGTTCGATGAATTCATGGATCAAGTGAAGGCACTGCGCGATCGGACGGCCGAGCTCCCTGATGAGTACTTCGTGGTACTTGTGGGTGATATGATCACGGAGGATGCACTACCTACCTATCAGACCATGATAAACAACCTGGATGCCGTTGGGGACGAGTCCGGAGCAAGCCCGGTTCCGTGGGCCGTTTGGACCCGTTCTTGGACGGCGGAGGAGAATAGGCATGGGGATTTGCTGAGAACCTATCTCTATCTATCCGGTCGGGTTGATATGCCCAAGGTTGAAAAAACCGTACAGTATTTGATTGGAGCCGGAATGGATGTGGGGACAGAAAACAACCCCTATCTGGGATTCGTGTACACGTCGTTTCAAGAGAGAGCCACATTTGTGTCACACGGCAACACGGCTCGGTTAGCGAAGGAGGGGGGAGATCCGGTGCTGGCGCGCATATGTGGCACCATCGCAGCGGACGAGAAACGCCACGAGAATGCTTACACGAGAATCGTCGAGAAGCTGCTGGAAGTGGACCCCAGTGAAGCAATGCGGGCGATCGCAGACATGATGCACAAGAAGATCACCATGCCGGCCCATCTGATGTACGACGGGGAGGACCCGCGCCTGTTCGAGCATTTCTCTGCGGTGGCGCAGCGGATGGGGGTGTACACGGCGAACGACTACGCGGACATATTGGAGTTTCTGATCGGACGATGGGGGTTGGAGAAGCTGGAAGGGCTGACGGGCGAAGGGAGGCGTGCACGGGATTTCGTGTGTGGACTAGCACCGAGGATTAGGAAGTTGCAAGAGCGAGCCGATGAGCGAGCGCGCAAGATGGGGCCTCATGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACTATGTGA 1176 0.5748 MQSCGYLTPQPWAPTTLYRTNRHPRLPTQAPRIRLPPSTSAVADPVKNRKAHSMPPEKAEVFKSLEPWASEGLLPLLKPVEQSWQPHNFVPDSSLPFDEFMDQVKALRDRTAELPDEYFVVLVGDMITEDALPTYQTMINNLDAVGDESGASPVPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMPKVEKTVQYLIGAGMDVGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYTRIVEKLLEVDPSEAMRAIADMMHKKITMPAHLMYDGEDPRLFEHFSAVAQRMGVYTANDYADILEFLIGRWGLEKLEGLTGEGRRARDFVCGLAPRIRKLQERADERARKMGPHGVKFSWIFNKEVALTM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00249 391 PIRSF Dlt9_acylACP_des 13 389 IPR005067 GO:0006631|GO:0045300
Accr3g00249 391 Gene3D Ribonucleotide Reductase, subunit A 42 389 IPR012348 GO:0016491
Accr3g00249 391 MobiDBLite consensus disorder prediction 15 57 - -
Accr3g00249 391 CDD Acyl_ACP_Desat 57 365 IPR005067 GO:0006631|GO:0045300
Accr3g00249 391 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 41 389 - -
Accr3g00249 391 SUPERFAMILY Ferritin-like 47 387 IPR009078 -
Accr3g00249 391 Pfam Fatty acid desaturase 57 383 IPR005067 GO:0006631|GO:0045300
Accr3g00249 391 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 43 387 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00249 Accr-Chr3 2626817 2628334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00249 30 389 Acyl Lipid Metabolism Gene Families AT1G43800 75.956 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00249 K03921 - qsa:O6P43_019843 602.053