Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00198 ATGGCGAAATCGAGCGCAGAAGATGCTGAACTCCGTCGAGCTTGCCAGGTTGCGGTTGATCATGAAGACCACAAACACAAGGTGGTTATGTCGATTCGTGTTGCCAAGAGTCGCGGAATTTGGGGAAAATCCGGCATGCTCGGCGTCGGCAGTCGTCAAGGAATGGCCAAGCCTAGGGTTCTCGCTCTCTGCCTCAAAGCGAAGGGTCAGAGGACAAAAGCTTTTCTTCGAGTCTTAAAGTATTCCAATGGAGGAGTTCTTGAGTGTGCGAAAACATACAAGTTGAAACACCTCTCAAAGATGGAACTTGTAACAGCTGACCCCAGTGGATGTTCGTTTACTCTGGTATTTGACAATAACATCAGAAACCATAGTGGGGCTCCTGCTCAGTGGACAATGCGCAATGTTGATGACAGGAATCGCATCCTAATCCATATCTTAAATATATGCAAAGATGTATTGGCTCGCCTTCCTAAAGTTGTTGGTTTAGATATTGTGGAGATGGCTATCTGGGCTAAGGAGAACACACCCGCAGTTGCTGCACAAGCCCAACCTCATGCAAACCCAGAAGATGGTGGTCCTGTAGAATATGATGTGACTGAGACAGAACTGACAGTCAATGTAGAGAAGGAACTTGTTTCTCAGGCAGAAGAAGAGGACATGAAGGTCCTTCTCGAAACTTATGCCATGATGGGTACTGGCGAAGCAGAGGCGTTTTCTGAAAGGCTGAAGAGAGAGCTTCAGGCTCTGGAAGCAGCAAATGTGCACGCCCTCTTAGAAAGTAAACCTCTGGTGGATGAGGTTTCGCAAGGGCTTGAAGCAGCGACAAATTGTGTGGAAGACATGGATGAATGGTTGTGCATTTTCAATGTGAAATTAAGGCACATGAGGGAGGATATTGAATCAATAGAAATACGCAACAACAAGTTGGAAATGCAATCAGCAAACAACAAAGTTCTTATTGAGGAAGTTGATAAGCTTCTTGAGAATTTGCATGTCCCTCCTGAGCTTGCAGCTAGTTTGACAGGAGGTCCACTTGATGAGGCACGTGTGCATCTGACTGTGGAAGCATGTGAGAGCCTGGTGGATGTCTTGCCTAGGCTCCAAGTGCCAAACATAGATCCTGCATTAGCAAATATGAGAGCTGTTAGAGACAGGCGTGCGGAACTTGAAAGCTTAAAAAGTAATTTTGTCAGGAGAGCTTCTGATTTCTTAACAAATCATTTTCATTCTTTGGTGCATTTCCTGATTAATGATACATACAATTCCCAGAAAGGACGGTTGAAGAAGCTTGATCATGCTGAGGCACGGTGCATATACAGGAAATATCCCCGCCTTGTGCAACTTTTAAAGGATCTTGATGAAAATTGCTTATATACATTGAGGAAAGCTTACTGCCGTTCTCTCAACTTGCTTCTCAGAAATGAGGCCCGTGAGTTTTCGGATGAACTTCGTGCTAGCACTAAAGCACCTAAGAATCCAACTGTTTGGCTTGAAGGCATCATAGGTTTAGGGCAGAATGCAAACACGGTTGACACTTCTTCACTTTCTGAGGCTTATGAAAAGATGCTTGCAGTTTTTGTCCCACTTCTGGTGGATGAGAGCTCTTTTTTTGCTGCCTTCATGTGTTTCGAAGTTCCCACAGTGGCTCCTCCTCCTCCAGGAGGCACTATTAATGGTGATGAAGATGGATATGATGACGATGATTCTGAAGCCAATGATGATGATTTGGGGATTGTGAACATTGACGAGAATGATAGTAAATCTGGCATTAATGCTGCGGAGCTTGCATCTTTAAATGAGTTCCTTCAGGATATGCTTGATGGAATCCAGGAAGACTTCTATGTTATAGTAGATTGGGCATACAAAATTGATCCCTTGCGCTGCATATCAATGCACGGAATAACAGAGCGCTTCCTCTCTGATCAGAAAGCTGATGCAGCTGGATTTGTTAGCCTTGTGCTTGGTGACCTAGAGTCTTACATATCCATGCAGTTCATTCGTTTTGTAGATGAAGCTTGCCATCAGATTGAAAGATATGAGCGCACTGGGCGCCAAACGGGGGTCTTGGGTTATATTCCGAGATTTGCAACCCTTTCAACACGGATGGAGCAATACATTCAAGGGCAGTCAAGGGATTTGGTTGACCAAGCTTATACTAAATTTGTTACCATAATGTTTGTGACGTTAGATAACATTTCCAAACAAACAGATCAAAAGGAAATTTTTCTTATAGAGAACTATGCAGCATTTCAAAATAGCTTGTATGACCTCGCTCACGTTGTTCCCACTCTGGCAAAGTTTTACCATCAGGCCAGTGAAAAATATGAAGAAGCCTGCACGCGCCATATAAGCATGCTTATTTACTATCAATTTGATCGTCTTTTCCAGTTTGCTAAAAAGATTGAGGACTATATGTCCACTATCGCACCTGAAGAGATTCCTTACCAGGTTCAGATGTCAAAAGGGGATCTTAGGAAGGTGATAAAAATCAGCTTAACAGGGGTTGATAGGTATTTTTATGCCATGCATAAGAAACTACAGAAGAACTTGACTTCAGAGGAATTGTTACCTTCCTTGTGGGATAAATGCAAGAGGGAATTTGTGAATAAGTATCGAAGTTTTGTTCAGCTTGTCGCAAGGACCTACCCGTTGGAGAAAATACCTTCTGTAGGTGAAATCGAAGACATTTTAGTTGGACTTTAA 2706 0.4331 MAKSSAEDAELRRACQVAVDHEDHKHKVVMSIRVAKSRGIWGKSGMLGVGSRQGMAKPRVLALCLKAKGQRTKAFLRVLKYSNGGVLECAKTYKLKHLSKMELVTADPSGCSFTLVFDNNIRNHSGAPAQWTMRNVDDRNRILIHILNICKDVLARLPKVVGLDIVEMAIWAKENTPAVAAQAQPHANPEDGGPVEYDVTETELTVNVEKELVSQAEEEDMKVLLETYAMMGTGEAEAFSERLKRELQALEAANVHALLESKPLVDEVSQGLEAATNCVEDMDEWLCIFNVKLRHMREDIESIEIRNNKLEMQSANNKVLIEEVDKLLENLHVPPELAASLTGGPLDEARVHLTVEACESLVDVLPRLQVPNIDPALANMRAVRDRRAELESLKSNFVRRASDFLTNHFHSLVHFLINDTYNSQKGRLKKLDHAEARCIYRKYPRLVQLLKDLDENCLYTLRKAYCRSLNLLLRNEAREFSDELRASTKAPKNPTVWLEGIIGLGQNANTVDTSSLSEAYEKMLAVFVPLLVDESSFFAAFMCFEVPTVAPPPPGGTINGDEDGYDDDDSEANDDDLGIVNIDENDSKSGINAAELASLNEFLQDMLDGIQEDFYVIVDWAYKIDPLRCISMHGITERFLSDQKADAAGFVSLVLGDLESYISMQFIRFVDEACHQIERYERTGRQTGVLGYIPRFATLSTRMEQYIQGQSRDLVDQAYTKFVTIMFVTLDNISKQTDQKEIFLIENYAAFQNSLYDLAHVVPTLAKFYHQASEKYEEACTRHISMLIYYQFDRLFQFAKKIEDYMSTIAPEEIPYQVQMSKGDLRKVIKISLTGVDRYFYAMHKKLQKNLTSEELLPSLWDKCKREFVNKYRSFVQLVARTYPLEKIPSVGEIEDILVGL 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00198 901 Pfam Exocyst complex component Sec3 236 489 IPR019160 GO:0000145|GO:0006887
Accr3g00198 901 Pfam Exocyst complex component Sec3 597 884 IPR019160 GO:0000145|GO:0006887
Accr3g00198 901 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 56 151 IPR028258 -
Accr3g00198 901 Coils Coil 240 260 - -
Accr3g00198 901 SMART Sec3_PIP2_bind_2 54 153 IPR028258 -
Accr3g00198 901 Coils Coil 293 330 - -
Accr3g00198 901 MobiDBLite consensus disorder prediction 553 574 - -
Accr3g00198 901 PANTHER SEC3/SYNTAXIN-RELATED 65 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00198 Accr-Chr3 2115822 2125674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00198 1 901 EF-hand Containing Proteins AT1G47550 70.796 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00198 K19983 - rcu:8260924 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00198 3 2115822 2125674 Accr3g00198 3 2115822 2125674 ECH