Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03416 ATGGGGACTGAAAATCCCGGACGTTCAAGTTTTCCTGCTAGGCCTGCCACGACACCTTTTGCTCCTCCACAGACTATGTCACCGTTTTCATCAACTGGTCCTGTGGTTGGATCTGAGCCTCCTTTCCCCCGTCCTCCCCCTCCTGCTGCTCCCCAGCCGTCAGTGCCATTGTCATCATCCGGACCTACTGTTACACCAGGGGCATCCAATTTTAGGCCTATCCCTCCTGGCAGGTTTAACGATCCATCTGTGCCTTCGCCTCCAACGTATAATGTCCCACCTGCCGGTGGACCTTTCCAGCGTTTTCCAACTCCACAGTTTACCTCAACTGCCCAAGCTCCTCCACTTGTTCCACCCATAGGACAACCATCAATGCTGCCTTCTGTGAATCAAGCACCGCCTTTCCCTGCAGCCCTTCAACCACAGACACCAATTGTTTCAATGGGTTCTCCCCCACAAATTGCTCCTCCTGCACCTTTGAAGTCTAATTTTCCTCCCTTGTCAGATTCATCATTTCCAGGGTCTAGGCCTAATTATCAGCCACCTTTTCCTGGATATGTCCGCAAGCAGACTGGTACTGAAATGCAAGGTCCACCCGTGCCTCCATCTTTTCCCACTAATCAAGGTAATTATGCACCTGCTCTATCTCATCAAGGGAGCTATGTTCCACCGCCTCCAGTGGCTGCTCCATTGGGCATGCAGCAGATGCAACAGCCAGGATATGGACCTTCTGTTGGTGCCATTCAGGGCCTGGCAGAAGACTTCAGTTCACTCTCTATTCAAACTCGTCCTGGTTCAATGGAAAAAGCAGTTGATGCTAAAGAACTTCCAAGGCCACTGGATGGTGATGTGGAGCCAACATCTCTGGCTGACCTTTTCCCCATGAACTGCAACCCCAGATATCTACGGTTGACAACCAGTGCAATTCCCAGCTCTCAGTCCTTAGCTTCAAGATGGCATCTACCTCTTGGAGCAGTTGTTTGCCCACTTGCAGAAGCTCCTGATGGGGAAGAGGTGCCTATAATCAATTTTGCCCCAACTAGTGTCATACGGTGTAGGAGATGTCGCACTTACGTGAATCCATATGTGACTTTCACAGATGCTGGAAGAAAATTTCGGTGCAATGTTTGTACTTTGCTGAATGACGTGCCTAGTGAATATTTTGCTCAATTAGATGCCACTGGTAGAAGAGTTGATTTGGATCAAAGACCTGAGCTTACAAAGGGTACTGTCGAATTTGTTGCCCCTGCTGAATATATGGTGCGACCTCCTATGCCTCCAGTGTATTTCTTCCTCATTGATGTTTCCATATCCGCGGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAGACATGTCTAGATGAGTTGCTTGGCTCTACACGAACCCAGATAGGTTTTGCGACTTTTGACAGCACAATTCATTTTTATAATATGAAGTCTTCCTTGACTCAGCCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTTCCAGATGATCTCCTTGTTAATTTATCTGAATCCAGAAGTGTGGTGGAGACCTTCCTTGATAGTTTACCATCCATGTTCCAGAACAATGCAAACGTTGAATCGGCCTTTGGTCCAGCTCTTAAGGCTGCATTCATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATTTTCCAAAACACACTGCCATCTCTTGGAGTTGGGCGCTTAAAATTACGTGGAGATGATGCTCATGCTTATGGGACTGATAAAGAACACATGTTAAGGTTGCCTGAAGATCCATTTTACAAGCAGATGGCTGCTGAGTTTTCTAAATACCAGATCTGTGCTAATGTGTATGCATTTAGTGACAAGTACACTGACATTGCATCCTTAGGAACTTTGGCAAAGTATACTGCCGGTCAAGTATATTACTATCCAGCTTTCCAATCAACTATTCATGGGGAGAAGTTGCGGCATGAGTTAAGGAGAGACCTAACCAGAGAAACTGCATGGGAAGCTGTACTGCGCATTAGGTGTGGAAAAGGTGTCCGCTTCACAACTTTTCACGGGAACTTCATGCTAAGATCTACCGATTTGTTGGCACTTCCAGCTGTAGATTGTGATAAAGCTTTTGCTATGCAGTTATCTCTTGAAGAGACATTGCTGACAACTCAGACTATGTATTTCCAAGCTGCATTGCTATATACTGCATCTTGTGGGGAAAGACGGATTAGAATACACACTGCTGCAGCTCCAGTAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACTGGTGCCATAGTTTCTGTACTTAGTCGGCTAGTAATTGAGAAAACATTGTCTAGCAAACTGGAAGATGCAAGGAGTGCTGTACAGCTAAGAATTGTCAAGGCCCTCAGAGAATATCGAAATCTACATGCTGTACAACATCGGTTGGCTAACAGGATGATATATCCTGAGTCTCTAAAATTCCTACCATTGTATGGCTTAGCAATTTGTAAATCAATACCCCTCCGTGGAGGGTATGCTGATGCTCTGCTGGATGAACGGTGTGCAGCAGGATACACAATGATGGCTCTACCGATAAAAGGGCTGTTGAAATTTCTATATCCAACCTTAGTTCGACTCAATGAATGTCTATTGAAGTCTGATGAATTAAAAAGCATTGAGAAAAGGTTACCATTGACTTGTGAGAGCTTGGATTCTAGAGGCCTTTATGTATATGATGATGGCTTCCGGTTCCTTATATGGTTTGGTAGAGTGCTTTTACCTGATATAGCTATGAATTTGCTTGGGGCAGACTTTGCTGCAGAATTATCAAAGGTTACTCTTAAGCAGCATGATAATGAGATGTCAAGGAGGCTAATCAGGATACTTGAGAAACTGAGAAATACTGATCATTCGTATTATCAGTTGTGCTATCTCGTGAGGCAAGGTGAACAGCCCAGAGAAGGATTCCTTATCCTTGCAAATCTTGTTGAGGACCAGATGGGTGGTAACAGTGGATATGCTGATTGGATGCTTCAGCTAGCGCAACAGGTGCAGCAATAA 3045 0.4522 MGTENPGRSSFPARPATTPFAPPQTMSPFSSTGPVVGSEPPFPRPPPPAAPQPSVPLSSSGPTVTPGASNFRPIPPGRFNDPSVPSPPTYNVPPAGGPFQRFPTPQFTSTAQAPPLVPPIGQPSMLPSVNQAPPFPAALQPQTPIVSMGSPPQIAPPAPLKSNFPPLSDSSFPGSRPNYQPPFPGYVRKQTGTEMQGPPVPPSFPTNQGNYAPALSHQGSYVPPPPVAAPLGMQQMQQPGYGPSVGAIQGLAEDFSSLSIQTRPGSMEKAVDAKELPRPLDGDVEPTSLADLFPMNCNPRYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEAPDGEEVPIINFAPTSVIRCRRCRTYVNPYVTFTDAGRKFRCNVCTLLNDVPSEYFAQLDATGRRVDLDQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKTCLDELLGSTRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPSMFQNNANVESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDAHAYGTDKEHMLRLPEDPFYKQMAAEFSKYQICANVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSTIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQAALLYTASCGERRIRIHTAAAPVVTDLGEMYRLADTGAIVSVLSRLVIEKTLSSKLEDARSAVQLRIVKALREYRNLHAVQHRLANRMIYPESLKFLPLYGLAICKSIPLRGGYADALLDERCAAGYTMMALPIKGLLKFLYPTLVRLNECLLKSDELKSIEKRLPLTCESLDSRGLYVYDDGFRFLIWFGRVLLPDIAMNLLGADFAAELSKVTLKQHDNEMSRRLIRILEKLRNTDHSYYQLCYLVRQGEQPREGFLILANLVEDQMGGNSGYADWMLQLAQQVQQ 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03416 1014 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 874 1013 IPR036180 -
Accr2g03416 1014 SUPERFAMILY Zn-finger domain of Sec23/24 341 423 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Accr2g03416 1014 FunFam protein transport protein Sec24D isoform X1 426 663 - -
Accr2g03416 1014 MobiDBLite consensus disorder prediction 38 55 - -
Accr2g03416 1014 SUPERFAMILY beta-sandwich domain of Sec23/24 181 759 - -
Accr2g03416 1014 MobiDBLite consensus disorder prediction 151 180 - -
Accr2g03416 1014 MobiDBLite consensus disorder prediction 78 100 - -
Accr2g03416 1014 SUPERFAMILY vWA-like 424 663 IPR036465 -
Accr2g03416 1014 Gene3D - 296 408 - -
Accr2g03416 1014 Pfam Sec23/Sec24 beta-sandwich domain 666 749 IPR012990 -
Accr2g03416 1014 Pfam Sec23/Sec24 helical domain 761 864 IPR006900 GO:0006886|GO:0006888|GO:0030127
Accr2g03416 1014 PANTHER SEC24-RELATED PROTEIN 130 1012 - -
Accr2g03416 1014 Pfam Sec23/Sec24 zinc finger 350 387 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Accr2g03416 1014 Pfam Sec23/Sec24 trunk domain 424 660 IPR006896 GO:0006886|GO:0006888|GO:0030127
Accr2g03416 1014 MobiDBLite consensus disorder prediction 1 127 - -
Accr2g03416 1014 Gene3D von Willebrand factor, type A domain 426 663 IPR036465 -
Accr2g03416 1014 Gene3D Severin 869 993 IPR029006 -
Accr2g03416 1014 Gene3D - 297 749 - -
Accr2g03416 1014 SUPERFAMILY Helical domain of Sec23/24 761 868 IPR036175 GO:0006886|GO:0006888|GO:0030127
Accr2g03416 1014 CDD Sec24-like 424 665 IPR041742 GO:0006886|GO:0006888|GO:0030127
Accr2g03416 1014 Gene3D Sec23/Sec24 helical domain 750 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03416 Accr-Chr2 69818029 69825753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03416 K14007 - gmx:100791083 1563.13