Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03375 ATGGCTTCCACTCTTTTCAGTCTGATTACTTTGTTTCTAGCTTTCTCTCCCCTTTCTCTCCAGATCATTGAGGCAGAAGCAGAAGAACTTCGTAGTCTGAAGCTTAATTCTCATATCCTCCAGGAGTTTATTGTTGAACAGATTAATGGAAATCCAAACGCAGGGTGGAAGGCCGCCATGAGTCCTCGTTTCTCAAATTATACAGTTGGTCAATTCAAGCACCTTCTAGGGGTCAAGCAAACAACTAGAAAGGAATTAAGAAATACTCCTGTAAAATCTCATCCAAAAGCATTAGAATTGCCAAATAAATTTGACGCAAGAACAGCTTGGAAGCAGTGTAGCACAATTGGAAGAATTCTAGATCAGGGTCACTGTGGTTCTTGCTGGGCATTCGGCGCTGTTGAATCACTATCAGACCGTTTCTGCATCCATTTTGGCATGAATGTATCACTCTCTGTCAATGACCTTCTCTCTTGCTGTGGATTTTTGTGTGGATCTGGCTGTGATGGAGGTTATCCCCTCAATGCTTGGCAATACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTCGATCAGATTGGTTGTTCTCACCCTGGTTGTGAGCCTGCATATCCGACTCCTATGTGTGTAAGAAAGTGCGCCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCACTACAGCGATAATGCATATGTGGTCAACTCTGATCCTTATGATATCATGACAGAAGTTTTTAAGAATGGGCCGGTTGAGGTCTCTTTCACAGTTTATGAGGATTTTGCTCACTACAAGTCAGGAGTATACAAACACATCACTGGTTCCGTGATGGGAGGTCATGCTGTAAAGCTAATTGGGTGGGGAACCAGCGATGATGGAGAGGACTATTGGCTTCTCGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGTTACTTCAAGATCAGAAGAGGCACAAACGAGTGTGGTATTGAAGAAGAGGTTGTTGCGGGTATGCCTTCCACTAAAAATCTTGTGTTGGAGGTGGCTGACGTGGACGAAGATGTTGTTTCATTCTGA 1068 0.441 MASTLFSLITLFLAFSPLSLQIIEAEAEELRSLKLNSHILQEFIVEQINGNPNAGWKAAMSPRFSNYTVGQFKHLLGVKQTTRKELRNTPVKSHPKALELPNKFDARTAWKQCSTIGRILDQGHCGSCWAFGAVESLSDRFCIHFGMNVSLSVNDLLSCCGFLCGSGCDGGYPLNAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPAYPTPMCVRKCANGNQLWSQSKHYSDNAYVVNSDPYDIMTEVFKNGPVEVSFTVYEDFAHYKSGVYKHITGSVMGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFKIRRGTNECGIEEEVVAGMPSTKNLVLEVADVDEDVVSF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03375 355 Pfam Papain family cysteine protease 100 334 IPR000668 GO:0006508|GO:0008234
Accr2g03375 355 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 53 328 IPR013128 GO:0008234
Accr2g03375 355 SUPERFAMILY Cysteine proteinases 47 336 IPR038765 -
Accr2g03375 355 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 122 133 IPR000169 -
Accr2g03375 355 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Accr2g03375 355 SMART pept_c1 100 335 IPR000668 GO:0006508|GO:0008234
Accr2g03375 355 FunFam cathepsin B-like protease 2 33 341 - -
Accr2g03375 355 CDD Peptidase_C1A_CathepsinB 101 334 - -
Accr2g03375 355 PRINTS Papain cysteine protease (C1) family signature 299 305 IPR000668 GO:0006508|GO:0008234
Accr2g03375 355 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Accr2g03375 355 PRINTS Papain cysteine protease (C1) family signature 122 137 IPR000668 GO:0006508|GO:0008234
Accr2g03375 355 Pfam Peptidase family C1 propeptide 40 81 IPR012599 GO:0004197|GO:0050790
Accr2g03375 355 Gene3D Cysteine proteinases 31 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03375 Accr-Chr2 69357226 69361099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03375 K01363 - gmx:100788988 574.318