Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03254 ATGGAGTCCTGCTATTGCATTGAGCCAGAGAATTGGCCCCAATATGAACTCATCATGAAATTTCAGTACATATCAGACATTCTAATAGCTCTTGCATATTTCTCTATTCCTCTGGAAATGATCTATTTTGTGAAGAAGTGTGCAATCTTCCCATATAGATGGGTTATTTTTCAGTCTGGAGCTTTCATTATCCTTTGTGGAGCATCTCACTTCGCAAGCTTGTGGACATTCTTCATGAACACTAAACAGATCGCTATGGTGATGTTAATAGCTAAAGCCTTGTGTGCTCTTATATCATGCGCCACTGCACTAATGCTTTTTCACGTCATCCCTGATCTTCTAAGCGTCAAAACTCGTGAACGCCTTCTCAAAAACAAGGCTGAAGAACTTGACAGAGAAATGGGACTTATTCTTACTCAAGAAGAAACTGGGAGACATGTCAGAATGTTAACTCATGAGATCAGAAGCACACTTGATAGGCATACCGTTCTTAACACCACCCTAGTTGAGCTGGGTCGAACTTTAAGGTTGGCGGAATGTGCACTGTGGATGCCCTCTAGATGTGGTCTCCAACTTCATCTGTCAAATTCATTAATTGGTGCACAAGTTAGCTACTGTGTCCCAACAAATCTTCCTATTGTTAGTAAAGTTTTCACTTGTCCTCAGGCGATGAGAATTCCACACACATGTCCCCTAGTCACTGTTAAACCTCTTGTTGGAAGATACAGGACACCTGAGGTGGTTGCTGTGAGAGTGCCTCTTTTGACTCTCTCAGATTTTCCTATTAATAATTGGCCAGATCTTTCTGCTGAGAGATATGCCATCATGGTCTTGATCCTCCCTACCGACAATGCTAGAAAATGGCGAGATCATGAACTGGAGCTTGTTGATGTGGTAGCAGATCAGGTGGCAGTGGCTCTTTCACATGCAGCTATATTGGAGGAGTCTGTGAGAGCCAGAGATCAACTCATGGAACAGAATATTCATTTGGATTTGGCACGGCGACAAGCAGAAGAGGCAGTCCCTGCTCAGACGGATTTTCTAGCTGTCATGAATCATGAGATGAGGACACCAACGCGCGCTATTATGGCATTGTCGTCACTTCTCTTGGAGACTGAACTCACTCCAGAGCAGAGGATTATGATAGAGACAACATTGAAGAGTAGCAACATGCTGGCAACACTTATTAGCGATGTTCTAGATCTTTCTAGACTAGATGATGGTAGCCTTCAATTAGAATTGGCAAAATTTAACCTTCACGAGCTTCTGGCAGAGGTTATTAACTTGATAAAGCCTATTGCCTCCCTGAAGAAGTTACGTGTGACTTTAACTCTGGACCCTCATCTGCCTGTCTTTGCCATTGGAGATGAGAAACGTCTAATGCAAACTCTTTTAGAGGTTGTGGGTAATGCTGTGAAATTCACTAGGAAGGGCTATGTTTCTGTGAGAGCATCTGTTGCAAGACCAAAAGTTTTAGAGGATTGGCGATCTCCTGAATTTTATCCAGCATCAAGTGATGCTCATCAACATTACATTGAAATACAGGTTAAGGATTCTGGATGTGGCATTTCCTCACAAGATATTCCTTATATTTTCACCAAATTTGCTGGGTCTCAAAGAGGACCAAGCAGCAGTGCAGGGCTTGGACTAGCCATGAGTAAAAGAATGGTGAAAGTGATGGAAGGAGACATGAGGGTTGAGAGTGAAGGCATAGGGAAAGGGACTACAAATACATTTATAGTGAAGCTTGGAATTTGA 1758 0.4261 MESCYCIEPENWPQYELIMKFQYISDILIALAYFSIPLEMIYFVKKCAIFPYRWVIFQSGAFIILCGASHFASLWTFFMNTKQIAMVMLIAKALCALISCATALMLFHVIPDLLSVKTRERLLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTVLNTTLVELGRTLRLAECALWMPSRCGLQLHLSNSLIGAQVSYCVPTNLPIVSKVFTCPQAMRIPHTCPLVTVKPLVGRYRTPEVVAVRVPLLTLSDFPINNWPDLSAERYAIMVLILPTDNARKWRDHELELVDVVADQVAVALSHAAILEESVRARDQLMEQNIHLDLARRQAEEAVPAQTDFLAVMNHEMRTPTRAIMALSSLLLETELTPEQRIMIETTLKSSNMLATLISDVLDLSRLDDGSLQLELAKFNLHELLAEVINLIKPIASLKKLRVTLTLDPHLPVFAIGDEKRLMQTLLEVVGNAVKFTRKGYVSVRASVARPKVLEDWRSPEFYPASSDAHQHYIEIQVKDSGCGISSQDIPYIFTKFAGSQRGPSSSAGLGLAMSKRMVKVMEGDMRVESEGIGKGTTNTFIVKLGI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03254 585 FunFam Ethylene receptor 1 310 406 - -
Accr2g03254 585 Gene3D - 139 308 IPR029016 -
Accr2g03254 585 FunFam Ethylene response sensor 137 308 - -
Accr2g03254 585 FunFam Ethylene receptor 1 408 585 - -
Accr2g03254 585 SMART gaf_1 159 317 IPR003018 GO:0005515
Accr2g03254 585 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 330 409 IPR036097 GO:0000155|GO:0007165
Accr2g03254 585 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 585 - -
Accr2g03254 585 PRINTS Bacterial sensor protein C-terminal signature 512 526 IPR004358 GO:0016310|GO:0016772
Accr2g03254 585 PRINTS Bacterial sensor protein C-terminal signature 544 562 IPR004358 GO:0016310|GO:0016772
Accr2g03254 585 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 397 582 IPR036890 -
Accr2g03254 585 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 583 IPR003594 -
Accr2g03254 585 Gene3D - 309 407 - -
Accr2g03254 585 Pfam His Kinase A (phospho-acceptor) domain 344 408 IPR003661 GO:0000155|GO:0007165
Accr2g03254 585 CDD HisKA 343 404 IPR003661 GO:0000155|GO:0007165
Accr2g03254 585 SUPERFAMILY GAF domain-like 159 318 - -
Accr2g03254 585 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Accr2g03254 585 Gene3D - 408 585 IPR036890 -
Accr2g03254 585 ProSiteProfiles Histidine kinase domain profile. 350 585 IPR005467 -
Accr2g03254 585 Pfam GAF domain 159 307 IPR003018 GO:0005515
Accr2g03254 585 SMART HKATPase_4 455 585 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03254 Accr-Chr2 68141403 68143760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03254 1 585 Miscellaneous Gene Families AT1G66340 65.705 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03254 K14509 - gmx:100794417 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03254 2 68141403 68143760 Accr2g03254 2 68141403 68143760 ECH