Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02898 ATGAAGAACGATAAAGAATCCAGATCAAATCGCAACAACCCTCTAAAGAAAACACGAAGAGTGACGATAGATGATGTTTTGCTAGCATCCCAAGAGACGAGGGAACAGAGGGAACAAAGGATCCGTAGTTTATTCGGTTTCTTTGATAAGGAAAATTCTGGTATCGTAGATTATGCCCAGATTGAAACTGCTCTATCTGAGCTTCATATACCTCCAGAATATAAACATGCCAAAGATTTCTTAAAAGCTTGTGATGCCAACAAAGACGGACGGGTTGATTATAAGGACTTCAAGAAGTATGTAGACAACAAGGAAATAGAGCTTTACCGCTTATTTCGAGCCATTGATGTCGAACACTATGGATGCATTGTGCCAGGAGAACTCTGTAAGGCTCTGGTCAAGGCAGGGATTCAGATTGATGAAGACGAAGTCGCCCTTTTTATGGAGCATGTGGACAAGGATAATAATGAGGTTATAACATTTGAAAAATGGAGGGATTTTCTTCTGCTTTACCCAAAAGAGGCCACTATTGAGAACATTTACCATTATATAGAGCGTGTGTGCCTTATTGATATTGGGGAACACTCTGTGAGTCCTACAGGCATCAGTGGAAACATCCATGCGGTTAAGTATTTGTTTGCTGGAGGATTGGCTGGGGCAGCATCACGCACAGCAACGGCACCCCTTGATCGTTTAAAGATCATATTGCAAATCCAAACCACAAGAACTCATATAATGCCTGCACTTAGAAACATATGGAAGCAAGATGGTTTCTTGGGGTTTTTCCGAGGGAATGGCTTAAACGTCCTGAAGGTGGCCCCTGAGAGTGCTATAAGATTTTACACTTACGAGACACTCAAAACTTGGATTGTAAATTCTAAAGGGGGTGGTGGGGCAATAAACCCTGATGTTGGGACCGTGGGGCACGTACTGGCTGGTGGGATGGCTGGTGGGATAGCTCAAGCTACAATATATCCAATGGACCTTATAAAAACAAGAGTACAGACCTATGCTTATCGTGAAGGCGTGAGATTTCCTCGTCTTGGAGCACTCTCTAAAGATATATGGGTTCAGGAAGGACCTCGTGCCTTCTATAGGGGTTTGGTACCTTCTCTTCTTGGGATTATCCCTTATGCTGGCATAGATATAGCTGCATATGAGGCTCTGAAAGATATGTCCAAGAAGTATATTCTTCATGATGGAGAACCTGGTCCTCTTGTACAAGTGTGCTGTGGGACAGTGTCAGGAGCCCTTGGAGCAACATGTGTATACCCATTACAGGTCGTTAGAACAAGAATGCAAGCTCAACGGTCCAATGCTAGTACAGCTTATAAGGGAATGACTGAAGTGTTCAGGAGGACTTTTGAGCAGGAAGGGTTTAGAGGATTCTACAAAGGGATATTTCCCAACCTTCTCAAAGTCATTCCGTCGGCAAGCATCACTTATGTGCTCTACGAAACTATAACAAAGGGTTTGAAATTGGAGTGA 1488 0.4321 MKNDKESRSNRNNPLKKTRRVTIDDVLLASQETREQREQRIRSLFGFFDKENSGIVDYAQIETALSELHIPPEYKHAKDFLKACDANKDGRVDYKDFKKYVDNKEIELYRLFRAIDVEHYGCIVPGELCKALVKAGIQIDEDEVALFMEHVDKDNNEVITFEKWRDFLLLYPKEATIENIYHYIERVCLIDIGEHSVSPTGISGNIHAVKYLFAGGLAGAASRTATAPLDRLKIILQIQTTRTHIMPALRNIWKQDGFLGFFRGNGLNVLKVAPESAIRFYTYETLKTWIVNSKGGGGAINPDVGTVGHVLAGGMAGGIAQATIYPMDLIKTRVQTYAYREGVRFPRLGALSKDIWVQEGPRAFYRGLVPSLLGIIPYAGIDIAAYEALKDMSKKYILHDGEPGPLVQVCCGTVSGALGATCVYPLQVVRTRMQAQRSNASTAYKGMTEVFRRTFEQEGFRGFYKGIFPNLLKVIPSASITYVLYETITKGLKLE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02898 495 Gene3D - 120 194 - -
Accr2g02898 495 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Accr2g02898 495 Pfam Mitochondrial carrier protein 206 293 IPR018108 -
Accr2g02898 495 Pfam Mitochondrial carrier protein 404 492 IPR018108 -
Accr2g02898 495 Pfam Mitochondrial carrier protein 304 395 IPR018108 -
Accr2g02898 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 304 392 IPR018108 -
Accr2g02898 495 FunFam Mitochondrial substrate carrier family protein 202 493 - -
Accr2g02898 495 Gene3D - 1 107 - -
Accr2g02898 495 SUPERFAMILY Mitochondrial carrier 206 487 IPR023395 -
Accr2g02898 495 SUPERFAMILY EF-hand 31 176 IPR011992 -
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 211 224 IPR002067 GO:0055085
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 365 383 IPR002067 GO:0055085
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 224 238 IPR002067 GO:0055085
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 264 284 IPR002067 GO:0055085
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 412 434 IPR002067 GO:0055085
Accr2g02898 495 PRINTS Mitochondrial carrier protein signature 319 337 IPR002067 GO:0055085
Accr2g02898 495 PANTHER SOLUTE CARRIER FAMILY 25 161 492 - -
Accr2g02898 495 SMART efh_1 143 171 IPR002048 GO:0005509
Accr2g02898 495 SMART efh_1 107 135 IPR002048 GO:0005509
Accr2g02898 495 SMART efh_1 76 104 IPR002048 GO:0005509
Accr2g02898 495 SMART efh_1 40 68 IPR002048 GO:0005509
Accr2g02898 495 Gene3D Mitochondrial carrier domain 202 493 IPR023395 -
Accr2g02898 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 289 IPR018108 -
Accr2g02898 495 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Accr2g02898 495 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Accr2g02898 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 403 491 IPR018108 -
Accr2g02898 495 ProSiteProfiles EF-hand calcium-binding domain profile. 139 174 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02898 Accr-Chr2 64863232 64865061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02898 1 495 EF-hand Containing Proteins AT5G51050 63.838 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02898 K14684 - qsa:O6P43_006116 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02898 2 64863232 64865061 Accr2g02898 2 64863232 64865061 ECH