Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02822 ATGGCAAAAACGCCATTTCATGATCCAGATATTACGAGGCCCCAAGATGCGTATAGGATATTAGTTGATAATTCAAACCAACCTTTTGAGCATGTCTGGATGGAGAATAGGGATGATGGTCAGAAGGTTCACCCTTTGATCAAGAGGAAACTCTCTGCCTTGGATTTTTTTCATAAAGATTGTTGGGATGTTGAGCCAATAAAGCCTCCCTCGATTGATTGCACCCCTTTCAAGATAGTGGAGGACCTCAAGGATTTGAAGGAGCTGGCTTACAAGCTGAAAGCTGTTCAAGAATTTGCGGTGGATCTCGAACATAATAGTTATCGTTCTTTTCAAGGACTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTGTGATAGACACTCTGAAGCTGCGAATTTATGTTGGGCCTTTTCTAAGGGAGCTTTTCAAAGATCCTACCAAGAGCAAGGTTATGCACGGAGCAGATGGAGATGTACGGTGGCTTCAAAGGGATTTTGGCATTTACATTTGTAATCTGTTTGACACTGGCCAGGCCTCAAGGGTATTAAAATTGGAAAGAAATAGTTTGGGGTATCTTCTACATCACTACTGTGGGGTTATTGCAGACAAACAGTACCAGATAGCAGATTGGAGACTACGTCCTCTTCCTGATGAGATGCTTAGATATGCCAGAGAAGATACCCACTATCTGCTGTATATATATGATTTAATGAAAAAGGAGTTATTTGGATTGTCTAAAGACTGTCAAAATTATGATAATCCTCTGCTGAAGGTGTACGAGCTCAGTTATGGTGTCTGCTTGCAGCTATATGAGAAAGAGCTTTGGACTGAAAACTCCTTCCTAAACATACATGGGTTGAAAAGGGCTGGTTTTAATGCTCTGCAATTGGCCGTTGCTTCAGGCCTTCATGGATGGCGGGATGTAGTTGCTCGCACAGAGGATGAGAGCACTGGCTATGTAATGCCAAATAAAACTCTTCTGGAAATTGCTAAGCACTTGCCTATCACAATCAGCGGACTTAAAAGTTTGATAAAGTCAGAGCAGCCATATGTTGAGTGGAACTATGTCAACATTGTCAACATCATTTTAAATTCTGGGCAAAATGCTTATGCTTTTGAAGCACTTGCACAAGAATTGGAAAGGCGACGTCTCACAGCTGGAAATGAAGAGATCAAGCTAGAGCAGACTGAAACTCACATGGCCCAAAAACATGCGAACGATCCTGGGAGTACGAGAACGAGATGCAACGACCAAGAAAACACAAATCAGGTCAGGGAGAATAGTTTGGTGTCCTATACTTCTGTTGAAGCGGAAGATGTCTCAGAATTATCATCAAACTTTGAAAGATGCTTCCAGCCGAACAATCAAAATAAAATCCGGACCATCCTAGAAAACTCAGGAACCCAGTGGCTTGTTGCAACTGAAGCCACATTTGATTTTGAACAGGTCAAGTTTGAAGACGATGCAGAGAGAATGCGTCCTCCTCATCAGTGTGACTGA 1512 0.422 MAKTPFHDPDITRPQDAYRILVDNSNQPFEHVWMENRDDGQKVHPLIKRKLSALDFFHKDCWDVEPIKPPSIDCTPFKIVEDLKDLKELAYKLKAVQEFAVDLEHNSYRSFQGLTCLMQISTRTEDFVIDTLKLRIYVGPFLRELFKDPTKSKVMHGADGDVRWLQRDFGIYICNLFDTGQASRVLKLERNSLGYLLHHYCGVIADKQYQIADWRLRPLPDEMLRYAREDTHYLLYIYDLMKKELFGLSKDCQNYDNPLLKVYELSYGVCLQLYEKELWTENSFLNIHGLKRAGFNALQLAVASGLHGWRDVVARTEDESTGYVMPNKTLLEIAKHLPITISGLKSLIKSEQPYVEWNYVNIVNIILNSGQNAYAFEALAQELERRRLTAGNEEIKLEQTETHMAQKHANDPGSTRTRCNDQENTNQVRENSLVSYTSVEAEDVSELSSNFERCFQPNNQNKIRTILENSGTQWLVATEATFDFEQVKFEDDAERMRPPHQCD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02822 503 SUPERFAMILY Ribonuclease H-like 11 261 IPR012337 -
Accr2g02822 503 Pfam 3'-5' exonuclease 78 245 IPR002562 GO:0003676|GO:0006139|GO:0008408
Accr2g02822 503 Gene3D HRDC domain 285 375 IPR044876 -
Accr2g02822 503 MobiDBLite consensus disorder prediction 401 421 - -
Accr2g02822 503 MobiDBLite consensus disorder prediction 406 421 - -
Accr2g02822 503 Gene3D - 3 284 IPR036397 GO:0003676
Accr2g02822 503 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 7 455 IPR045092 GO:0000175|GO:0000467
Accr2g02822 503 CDD Rrp6p_like_exo 73 263 - -
Accr2g02822 503 FunFam Putative exosome component 10 283 378 - -
Accr2g02822 503 FunFam Protein RRP6-like 2 isoform A 10 281 - -
Accr2g02822 503 SMART 35exoneu6 77 246 IPR002562 GO:0003676|GO:0006139|GO:0008408
Accr2g02822 503 SMART hrdc7 296 380 IPR002121 GO:0003676
Accr2g02822 503 Pfam HRDC domain 299 360 IPR002121 GO:0003676
Accr2g02822 503 ProSiteProfiles HRDC domain profile. 296 376 IPR002121 GO:0003676
Accr2g02822 503 SUPERFAMILY HRDC-like 279 368 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02822 Accr-Chr2 64166734 64171911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02822 K12591 - qsa:O6P43_009894 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02822 2 64166734 64171911 Accr2g02822 2 64166734 64171911 ECH