Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02724 ATGGCCAAAGGCGTAGTCTCAGACGACGAAGAAGAGGTCGAACTCGAAGAGGAGGATAGGGAGCCAGTTGATGGAGATGGTATGGATGATGAAGAGGACGAGGACGAGGACGAAGAAGAGGGTCAGGATGAATATGAGAATGATGGATTTATAGTTGACGACGTTGAGGAAGAGGAGGAACAAGACGAAGAAGAGAGGGCAGAAAGTGATGAGGAACGGCAGAAGAAGAAGAAAAGGAAGAAAAAGGAGGATTATGTTCTGGATGAAGATGATTATGCTCTTCTAGAGGACAATAATATCAACATTCACCGTAGGAAGGAGAGCAAAAAGTTTAAGAGGCTGAAAAAAGGCCAGAGGGACACTGAGGATGAGCCCTCAGGATTATCTGATGAGGAGGAATTTATTGGAAGCGGTAAAGGCGGGCGAACTGCTGAGGAGAAGCTTAAGCGCAGCTTGTTTGGTGATGATGAAGGAGCTCCACTTGAAGATATTGTTGAAGAGGAGGAACAGGGAGAAGAGGAGGAGGATGCAGACATCGGTGAAGAAGATGAAATGGCGGACTTCATCGTGGAAGAAGATGAAGTTGATGAACATGGGGCTCCCATGAGGCGAAAGAAGCTGAAGAAAAAGAAAGCTAGGCAAGCACCAGGAGTGTCTTCTTCTGCATTGCAAGAAGCTCAGGAATTATTTGGTGATGTTGATGAGTTGCTGCAGTCTCGCAAGCAAAGTATGGAACAACGTGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCTGTTGTCCTTTCTGAGAAATATATGACAGAGAAGGATGATCAAATTAGGGAGCTTGATATTCCAGAGAGAATGCAGATATCAGAGGAGAGTACTGGTGCACCTCCACTGGATGAAGGAATTATGGAAGAGGAGGGTCAATGGATATATGATCAGCTTAAAAAGGGAATGGTACCTTGGATTCACAAGAAAGATGCTGGCAATTTACAGATTAACACTCGTGATATCATCAGATTTTTGGAACTGCATCATGTCCAAAAGTTAGACATTCCATTTATTGCTATGTATCGGAAGGAGGATTGCTCAAGCCTATTGAAAAATACTGAGCAACCTGATGATGAGACTTGGGATAAAAATGAGAAGCCTCCAACTTTAAAATGGCACAAGGTGCTTTGGGCAATTCAAGACTTGGACCAAAAGTGGTTGCTTCTACAGAAACGAAAAAATGCCCTCCAAGCCTACTACAATAAACGATTTGAAGAAGAGTCCCGTCGTGTTTATGATGAAACAAGACTCGAATTGAACCATCAATTGTTTGAGTCAGTTATGAGATCATTGAAGGCTGCAGAATCAGAGAGGGAGGTTGATGATGTTGACTCAAAATTCAACTTGCATTTCCCTCCAGGGGAAGTTGGTGTTGATGAAGGGCAATTTAAAAGACCTAAAAGGAAATCAACGTATAGTACTTTCAGTAAGGCAGGGCTTTGGGAGGTTGCAAACAAGTTTGGGCGTAGTGCTGAGCAACTTGGAATGATTTTATCGCTTGAAACAATGATTAACGAGTTGGCGAATCCTAAGGAAACACCTGAAGAGATGGCTTCAAATTTTACATGTGCGATGTGTGATACACCTCAAGAAGTACTTAAATATGCTAGGCACATGGCAGCTGTTGAGATTAGTTGTGAGCCTAGCATCAGGAAACATGTCCGTACCAACTTTATTGACCATGCTGTGGTATCAACGTGTCCCACTGCTGATGGAAATGTAACTATAGATTCTTTCCATCAGTTTGCTGGGATAAAGTGGTTGCGGGAGAAGCCATTATCTAAATTTGAGGATGCACAATGGCTCCTTATACAGAAGGCAGAGGAGGAGAAACTCCTTCAAGTTACTATTAAGCTGCCTGTAGAGTATCTTGATAAGTTGACAAATGAATTCAATGATTATTACATCAGCGACAGTGTTAGTAGGTATGCCCAACTGTGGAATGAACAGAGGAAGTTGATACTGCATGATGCAATTTTTCGCTTTCTCTTACCATCAATGGAAAAAGAGGCAAGAGCTTATTTAATGAGTAAAGCAAAGAATTGGTTACTCATGGAGTACGGGAAGGCACTGTGGAATAAGGTTTCTTTGGGACCTTATCAACGGAAGGATAATGATCTTAGTGCTGATGATGAAGCTGCCCCTAGGGTTATGGCTTGCTGTTGGGGTCCTGGAAAGCCGCAGACAACTTTTGTCATGTTAGATTCATCAGGGGAAGTGTTAGATGTTCTTTACACTGGGTCCCTTACTTTACGATCTCAAAATGTTAATGATCAGCAACGGAAGAAAGATTATCAGGAGCGTGTTCTGAAGTTCATGACAGACCACCAGCCACATGTTGTTGTTCTAGGAGCTGTGAATTTGTCTTGTACTCGTTTGAAGGAAGATATATATGAGATAATTTTTAAAATGGTGGAAGAAAATCCTAGAGATGTGGGTCATGAGATGGATGGCCTCAGCATTGTGTATGGGGATGAATCTCTTCCACATTTGTATGAAAATTCTCGAATTTCCTCCGAACAACTGCCCTCACAGAAAGGTATAGTGAGGCGGGCTGTAGCACTTGGAAGGTGTCTGCAGAATCCCTTGGCAATGGTTGCAACATTATGTGGACCTAGAAAAGAAATTTTATCATGGAAACTGAGTTCCTTGGAGAGCTTTCTCAACCCTGATGAGAAGTTTGGGATGGTTGAGCAGATCATGGTAGATGTGACAAATCAGGTGGGCTTAGATGTTAATTTAGCCATAAGTCATGAGTGGCTGTTTGCTCCTTTACAGTTTATTTCTGGGCTTGGTCCAAGAAAGGCTGCATCGTTACAGAGGTCCCTAGTAAGAGCTGGAGCAATATTTACACGGAAGGACTTTGTGACAGAACATAAACTGGGTAAAAAGGTTTTTGTCAACGCTGTAGGTTTTTTGCGTGTTCGGAGGAGTGGATTGGCTGCTAGCAGCAGCCAATTTATTGATTTGCTAGATGATACAAGAATTCATCCAGAATCATATACTCTTGCACAAGAGTTGGCCAAAGATGTGTATGAGGCGGATGGCACAGGTGATGCAAATGATGACGATGATGCACTGGAGATGGCTATAGAGCATGTGAGAGATCGGCCTAGTTTTTTGAAAAACCTTGATGTTGAGGAATATGCTTCAGCGAAGAAGAGGCTGAATAAAAAAGAAACTTTCTATGACATAAAGAGAGAACTGATTCAGGGATTTCAGGATTGGCGCAAGCAATATGAAGAACCAAATCAGGATGAGGAGTTTTATATGATATCAGGTGAGACTGAGGAGACCCTTGCTGAAGGGAAAATTGTCCAAGCTACAATTCGCAGAGTGCAAGCCCAGAAGGCCATATGTGTGCTTGAATCGGGGTTAACTGGAATTCTCATGAAAGAAGACTACACAGATGACTGGAGGGATTTGGTTGATTTATCTGACAGGCTACATGAGGGTGACATACTCACTTGCAAAATTAAATCAATTCAGAAGAATAGGTATCAGGTATTCCTTGTTTGTAGGGAGAGTGAAATGAGAAGTAACCGTTTACAGAGTAACCGTAATCTTGACCCCTATTATTACGAAGACCAGAGCTCTCAACAGAGTGAACAAGACAAAGCTCGCAAAGAAAAAGACCTTGCAAAGAAACACTTCAAGCCTAGGATGATAGTTCATCCACGTTTTCAGAACATAACTGCAGACGAAGCAATGGAGTTCTTGTCTGACAAAGATTTTGGAGAAAGTATAATCCGGCCTAGTTCACGTGGACCTTCATTTCTTACTTTAACTCTCAAAATCTATGATGGAGTCTATGCCCACAAAGATATAATTGAAGGTGGAAAGGAACACAAGGACATCACAAGCCTACTTCGAATTGGGAAGACACTGAAAATTGGAGAGGACACTTTTGAGGATTTAGATGAGGTAATGGATCGCTACGTTGATCCATTGGTAGTTCACTTAAAGGCAATGCTAAATTATCGCAAGTTCAAGAAGGGTACAAAGGCAGAAGTTGATGAACTTTTGAGGATAGAGAAAGCTGAGTATCCTATGCGGATAGTCTATAGTTTTGGCATCTCTCATGAACATCCAGGCACATTCATATTGACTTATATAAGAAGCACGAATCCCCACCATGAGTACATTGGGCTTTATCCAAAAGGATTCAAATTTCGGAAAAGGATGTTTGAGGACATTGATCGGCTTGTAGCGTATTTCCAGAGGCACATTGACGATCCCCAGCATGATGTGGCACCTTCCATTAGATCTGTTGCTGCTATGGTACCAATGAGAAGCCCAGCCACTGGCGGATCCTCAGGGGCATCAGTGGGTAGTGGGTGGGGTTCTAATGAGGGTGGCTGGAGAAGTCACACAGGTGATAGGGATCGTTCTTCCACACCTGGTTCCAGGACAGGGCGAACTGATTACAGAAACAGTGGGAATCGGGATGATCACCCCAGTGGTCTGCCTCGCCCATACAGTGGTGGACGTGGACGTGGTCGAGGCTCATATAACAGCAGGGGAAACAACTCTAATAATGAAAGGCACGATTCTGGCTTTGGTGCAGCCAGATGGGGTTCCGTCACAAAGGATGGAGACGATGGTTTAAGCAATTTTCCAGGAGCCAAGGTTCAAAATTCCCCAGGAAGGGAAGCCTTTCCTGGTGGTTGGGGCGATGGTGATGGTGCAAATGATGCAGAGCGTGGAACCTCTGGCTGGGGAAGTGGCACTGGCTGGTGA 4782 0.4331 MAKGVVSDDEEEVELEEEDREPVDGDGMDDEEDEDEDEEEGQDEYENDGFIVDDVEEEEEQDEEERAESDEERQKKKKRKKKEDYVLDEDDYALLEDNNINIHRRKESKKFKRLKKGQRDTEDEPSGLSDEEEFIGSGKGGRTAEEKLKRSLFGDDEGAPLEDIVEEEEQGEEEEDADIGEEDEMADFIVEEDEVDEHGAPMRRKKLKKKKARQAPGVSSSALQEAQELFGDVDELLQSRKQSMEQREYRETRLEDEFEPVVLSEKYMTEKDDQIRELDIPERMQISEESTGAPPLDEGIMEEEGQWIYDQLKKGMVPWIHKKDAGNLQINTRDIIRFLELHHVQKLDIPFIAMYRKEDCSSLLKNTEQPDDETWDKNEKPPTLKWHKVLWAIQDLDQKWLLLQKRKNALQAYYNKRFEEESRRVYDETRLELNHQLFESVMRSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSTYSTFSKAGLWEVANKFGRSAEQLGMILSLETMINELANPKETPEEMASNFTCAMCDTPQEVLKYARHMAAVEISCEPSIRKHVRTNFIDHAVVSTCPTADGNVTIDSFHQFAGIKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPVEYLDKLTNEFNDYYISDSVSRYAQLWNEQRKLILHDAIFRFLLPSMEKEARAYLMSKAKNWLLMEYGKALWNKVSLGPYQRKDNDLSADDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKDYQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPHLYENSRISSEQLPSQKGIVRRAVALGRCLQNPLAMVATLCGPRKEILSWKLSSLESFLNPDEKFGMVEQIMVDVTNQVGLDVNLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYTLAQELAKDVYEADGTGDANDDDDALEMAIEHVRDRPSFLKNLDVEEYASAKKRLNKKETFYDIKRELIQGFQDWRKQYEEPNQDEEFYMISGETEETLAEGKIVQATIRRVQAQKAICVLESGLTGILMKEDYTDDWRDLVDLSDRLHEGDILTCKIKSIQKNRYQVFLVCRESEMRSNRLQSNRNLDPYYYEDQSSQQSEQDKARKEKDLAKKHFKPRMIVHPRFQNITADEAMEFLSDKDFGESIIRPSSRGPSFLTLTLKIYDGVYAHKDIIEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVVHLKAMLNYRKFKKGTKAEVDELLRIEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDVAPSIRSVAAMVPMRSPATGGSSGASVGSGWGSNEGGWRSHTGDRDRSSTPGSRTGRTDYRNSGNRDDHPSGLPRPYSGGRGRGRGSYNSRGNNSNNERHDSGFGAARWGSVTKDGDDGLSNFPGAKVQNSPGREAFPGGWGDGDGANDAERGTSGWGSGTGW 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02724 1593 FunFam Transcription elongation factor spt6 1337 1429 - -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 135 157 - -
Accr2g02724 1593 Coils Coil 52 84 - -
Accr2g02724 1593 SUPERFAMILY RuvA domain 2-like 900 990 IPR010994 -
Accr2g02724 1593 FunFam Transcription elongation factor spt6 476 740 - -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 9 67 - -
Accr2g02724 1593 SMART rnase_8s 729 847 IPR006641 GO:0006139
Accr2g02724 1593 Pfam HHH domain 1004 1091 IPR041692 -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 1446 1593 - -
Accr2g02724 1593 Pfam Acidic N-terminal SPT6 31 120 IPR028083 -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 1 83 - -
Accr2g02724 1593 SUPERFAMILY Tex N-terminal region-like 319 708 - -
Accr2g02724 1593 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 9 1489 IPR017072 GO:0032968
Accr2g02724 1593 FunFam Transcription elongation factor spt6 719 889 - -
Accr2g02724 1593 SUPERFAMILY RuvA domain 2-like 1003 1092 IPR010994 -
Accr2g02724 1593 Gene3D SH2 domain 1225 1335 IPR036860 -
Accr2g02724 1593 CDD SH2_Nterm_SPT6_like 1239 1327 IPR035019 -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 1449 1466 - -
Accr2g02724 1593 Pfam Holliday-junction resolvase-like of SPT6 728 884 IPR028231 -
Accr2g02724 1593 SMART S1_6 1115 1188 IPR022967 -
Accr2g02724 1593 Gene3D - 719 1109 IPR037027 GO:0006139
Accr2g02724 1593 Gene3D - 998 1090 IPR042066 -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 1203 1225 - -
Accr2g02724 1593 FunFam Transcription elongation factor spt6 899 992 - -
Accr2g02724 1593 Gene3D - 258 992 - -
Accr2g02724 1593 CDD SH2_Cterm_SPT6_like 1338 1424 IPR035018 -
Accr2g02724 1593 Gene3D SH2 domain 1337 1432 IPR036860 -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 108 222 - -
Accr2g02724 1593 FunFam Transcription elongation factor spt6 291 473 - -
Accr2g02724 1593 PIRSF Spt6 3 1492 IPR017072 GO:0032968
Accr2g02724 1593 MobiDBLite consensus disorder prediction 1517 1531 - -
Accr2g02724 1593 SUPERFAMILY Nucleic acid-binding proteins 1112 1192 IPR012340 -
Accr2g02724 1593 Gene3D - 291 484 IPR023319 -
Accr2g02724 1593 Gene3D - 1110 1197 IPR012340 -
Accr2g02724 1593 ProSiteProfiles S1 domain profile. 1117 1188 IPR003029 GO:0003676
Accr2g02724 1593 MobiDBLite consensus disorder prediction 68 83 - -
Accr2g02724 1593 MobiDBLite consensus disorder prediction 159 194 - -
Accr2g02724 1593 FunFam Transcription elongation factor spt6 1225 1336 - -
Accr2g02724 1593 Coils Coil 28 48 - -
Accr2g02724 1593 SUPERFAMILY Ribonuclease H-like 729 884 IPR012337 -
Accr2g02724 1593 FunFam Transcription elongation factor spt6 1110 1198 - -
Accr2g02724 1593 SUPERFAMILY SH2 domain 1242 1328 IPR036860 -
Accr2g02724 1593 FunFam Transcription elongation factor Spt6 996 1090 - -
Accr2g02724 1593 Pfam Helix-hairpin-helix motif 888 989 IPR032706 -
Accr2g02724 1593 Pfam SH2 domain 1207 1423 IPR035420 -
Accr2g02724 1593 Gene3D - 485 922 IPR023323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02724 Accr-Chr2 63144457 63153186 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02724 K11292 - gmx:100808591 2555.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02724 2 63144457 63153186 Accr2g02724 2 63144457 63153186 ECH