Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02648 ATGAAGCTTATCAGCCTGAACTCCAAATCCTTCAGGCTCAATCCCAAACAGCTCTTTTCCAAGAGGGAACGCTCCGTTTCCAGATCCGATCCATCATCATTCAGCTATGGAACGTCATCATCTTCTTCCGAAGGCTCCACTCACAAGCCTGCGCCGGGCGCCCCCGGCTCCACGACTCCCACCAGCGTCTTGCCGGACATTTACCCCGACTGGGCTGATCTGTCGACTGATATTCACTCCGATTTGGCTCAGGCTTTGAGGCTCATCGACCGAGATGACGACGGCATCATCTCGCGCGAAGAGCTTGAGGCCTTCCTGACCCGGCTTGGAGAGAGCGAGGACGACGTGGCAATGATGCTCAGTGACGTAGATCCTGAAGGACGGGGGTGCATCAGCGTTGAAACGCTTATGAACCGGGTCGGCTCGGGTTCTGGTCCGGCGCCGGACTGCAACGACTTGAAGGAGGCCTTTGAGGTTTTCGATGCGGATCGGGACGGGAAAATCTCGGCGGAGGAACTGCTAGGGTTTTTCAAGGCTATCGGGGACGAGCGGTGCACGTTAGAGGAATGCCGGCGCATGATAAAAGGGGTTGATAAGAACGGGGATGGATTTGTGTGCTTCGAGGAATTTTCTCGAATGATGGAGCTGCAGAGATGA 657 0.5556 MKLISLNSKSFRLNPKQLFSKRERSVSRSDPSSFSYGTSSSSSEGSTHKPAPGAPGSTTPTSVLPDIYPDWADLSTDIHSDLAQALRLIDRDDDGIISREELEAFLTRLGESEDDVAMMLSDVDPEGRGCISVETLMNRVGSGSGPAPDCNDLKEAFEVFDADRDGKISAEELLGFFKAIGDERCTLEECRRMIKGVDKNGDGFVCFEEFSRMMELQR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02648 218 ProSitePatterns EF-hand calcium-binding domain. 161 173 IPR018247 -
Accr2g02648 218 Gene3D - 63 142 - -
Accr2g02648 218 FunFam calmodulin-like protein 3 147 218 - -
Accr2g02648 218 SUPERFAMILY EF-hand 68 214 IPR011992 -
Accr2g02648 218 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 152 215 - -
Accr2g02648 218 SMART efh_1 152 180 IPR002048 GO:0005509
Accr2g02648 218 SMART efh_1 115 143 IPR002048 GO:0005509
Accr2g02648 218 SMART efh_1 81 109 IPR002048 GO:0005509
Accr2g02648 218 SMART efh_1 189 217 IPR002048 GO:0005509
Accr2g02648 218 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Accr2g02648 218 Pfam EF-hand domain pair 152 214 IPR002048 GO:0005509
Accr2g02648 218 ProSiteProfiles EF-hand calcium-binding domain profile. 185 218 IPR002048 GO:0005509
Accr2g02648 218 MobiDBLite consensus disorder prediction 20 62 - -
Accr2g02648 218 MobiDBLite consensus disorder prediction 29 62 - -
Accr2g02648 218 Gene3D - 145 218 - -
Accr2g02648 218 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Accr2g02648 218 CDD EFh 152 214 IPR002048 GO:0005509
Accr2g02648 218 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Accr2g02648 218 Pfam EF hand 84 105 IPR002048 GO:0005509
Accr2g02648 218 ProSitePatterns EF-hand calcium-binding domain. 198 210 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02648 Accr-Chr2 62286055 62286711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02648 9 218 EF-hand Containing Proteins AT3G10190 48.837 2.48e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02648 K13448 - qsa:O6P43_006439 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02648 2 62286055 62286711 Accr2g02648 2 62286055 62286711 ECH