LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g02604	ATGGCAGTGGGGAAGGAAGAGGTAGAGATTTTTAAAGCTCGCTCGGATAAGAGGGATTACAGAAGGATTGTTCTCCCGAACTCGCTTGAAGTACTTCTCATCAGCGATCCTGATACTGATAAGTGTGCTGCTTCTATGGACGTTGGTGTTGGCTCCTTCAGTGATCCAGACGGTCTTGAAGGCCTTGCCCATTTTCTTGAGCACATGCTGTTTTATGCCAGTGAAAAGTACCCCATAGAAGATAGCTACTCCAAGTGTATTACTGAGCATGGAGGAAGCACCAATGCTTTTACATCCTCCGAGCACACCAACTACCACTTTGATGTTAATATTGATGCTTTTGAAGAGGCTTTAGACAGATTTGCTCAGTTTTTCATTAAACCATTGATGTCTGCCGATGCTACCATGAGGGAAATCAAAGCGGTTGACTCTGAAAACCAGAAGAACTTATTATCTGATGCTTGGAGGATGAACCAACTTCAGAAACATCTCAGTTGTGAGGACCATCCATTTCATAAATTTAGTACAGGGAATTGGGACACTTTGGAAGTTCGACCGAAAGAAAGAGGATTGGACACAAGGAATGAGCTTATCAAGTTCTATGAAGCAAACTATTCGGCCAATTTGATGCATCTAGTTGTATATACTAATGAAAGCCTTGATAAAATTCAAAATCTGGTGGAAGAGAAATTCTCGGATATTCGAAACACTGACCGAAGTTATTTCCGCCCTCCCGGTCAGCCATGCAAATCGGACCATCTTCAGATTCTTGTCAAAACTGTCCCAATCAGACAAGGTCATAAATTGAGAATTGTATGGCCAGTAACCCCTGAGATTCGTTACTACACAGAAGGGCCATGCAGGTATCTTGGTCATCTTATTGGCCATGAGGGAGAAGGATCGTTATATTACATCTTGAAAACACTGGGATGGGCAACAGGCTTGTCTGCGGGTGAATCAGATTTGAATCTGGACTTTTCTTTCTTTAAAGTCGTAGTTGATCTTACTGATGCTGGTCATGATCACATACAGGACATTATAGGGCTGTTATTCAAATACATTGAGCTTCTACGGCACTCTGGTGTTTGCCAATGGATTTTTGATGAGCTTTCATCTGTTTGTGAGACCACGTTCCATTATCAGGACAAGACTCGTCCAATTAGTTATGTAGTTAATATTGCATCAAATATGCAGTTATATCCCCCTAAAGATTGGTTGGTAGGGTCAGCTCTGCCTTCTAAATTTAACCCAAGTGTTATCCAGATGGTGCTGAATCAGCTTTCTCCGGACAATGTTCGAATCTTTTGGGAATCAAAAAACTTCGAAGGGCATACTGATAAGGTGGAGCCATGGTACGGAACTACATATTCCATCGAAAGAATTACAAGCTCCACAATTCAGGAGTGGGTCCTTTCTGCTCCTAAGGAAGATCTGCATCTTCCAGCACCTAACATATTCATTCCTACTGACTTGTCACTTAAGATTGTGCAAGAGAAGGTTAAGTTTCCAATTCTATTAAGCAGGACATCGTATTCAGCCTTATGGTACAAGCCAGATACCATGTTTTCCACTCCCAAGGCTTGTGTAAAGATAGATTTCAATTGTCCATATGCTGGAAATTCCCCTGAAGCTGAAGTTTTAAGTGATATTTTCACGCAATTATTGATGGACTACTTGAATGAATATGCTTACTATGCTCAGGTAGCTGGTTTGTATTACGGCATAAGCCACACGGATAGTGGTTTTCAGGTGACCCTTTTTGGTTATAACCATAAACTAAGAATTCTACTTGAAACCATCATTGAAAAGATTGCAACATTCACAGTGAAGGAGGACAGGTTCCTAGTTATTAAGGAAATGGTTACCAAGGAGTACCAAAATTTCAAGTATCAACAACCCTATCAGCAAACTATGTACTATTGCTCATTGATACTACAAGATAATACCTGGCCATGGATAGAAGGGCTTGAAGTACTTCCACGTCTTCAGGCGGAGGATCTGGTCAAATTTGTTCCAGTGATGCTCTCAAGGACCTTTTTAGAGGTTTATATAGCCGGAAACATTGAAAACAATGAAGCAGAGTCAATGGTTAGGCACATAGAAGATACTCTTTTTAAGTGTGAAAACTCTCTATGCAAGCCTTTATTCCCATCTCAGCATTTGACAAATCGGGTTGTTAAGCTTGAAAGCGGCGTGAATTATTTCTACCCTTCAGAATGTCTCAATCCGAATGATGAGAATTCTGCTCTTGTTCACTATATACAGGTTGGCCGTGATGACTTTAAGATGAATGTAAAACTTCAGCTTTTTGCGCTTATTGCAAAGCAATCAGCTTTTCACCAGCTTCGATCAGTTGAACAGCTTGGATACATTACTGTGCTCATGCAGAGGAATGATTCAGGTATTCGGGGAGTGCAATTTATCATCCAATCCACTGTGAAGGGTCCTGGAGACATTGAGAAGAGAGTTGAGGCATTTCTCAAGATGTTTGAGGAAAAACTTTTTGAGATGTCGGTTGAAGAATTCAAGGGGCATGTAAACGCATTGATAGATGTGAAGCTTGAGAAACACAAGAACTTACGTGAGGAGTCATCATTTTATTGGAGAGAGATTAATGATGGAACTTTGAGGTTTGATAGAAGAGACTTTGAGGTTGCAGAGTTAAGGCAGCTCACTCTTCCAGAACTCGTAGATTTCTTCAATGAATATATTAAAGTCGGTGCTTCACGGAAGAGGACCTTAAGTGTTCGAGTATATGGGAACCTTCATTCATCGGATTTTAAAGCTGAAGTTTCACAATCACAGCCAACTAATTCTTTGGAAGTACAATCACAGCCAACTAAAATAGATGATATTTGCTGTTTTAGAAAATCTCAGCCTTTGTATGGTTCATTTAAAGGACTTTCGGGTCAGGTGAAGTTATAG	2925	0.4055	MAVGKEEVEIFKARSDKRDYRRIVLPNSLEVLLISDPDTDKCAASMDVGVGSFSDPDGLEGLAHFLEHMLFYASEKYPIEDSYSKCITEHGGSTNAFTSSEHTNYHFDVNIDAFEEALDRFAQFFIKPLMSADATMREIKAVDSENQKNLLSDAWRMNQLQKHLSCEDHPFHKFSTGNWDTLEVRPKERGLDTRNELIKFYEANYSANLMHLVVYTNESLDKIQNLVEEKFSDIRNTDRSYFRPPGQPCKSDHLQILVKTVPIRQGHKLRIVWPVTPEIRYYTEGPCRYLGHLIGHEGEGSLYYILKTLGWATGLSAGESDLNLDFSFFKVVVDLTDAGHDHIQDIIGLLFKYIELLRHSGVCQWIFDELSSVCETTFHYQDKTRPISYVVNIASNMQLYPPKDWLVGSALPSKFNPSVIQMVLNQLSPDNVRIFWESKNFEGHTDKVEPWYGTTYSIERITSSTIQEWVLSAPKEDLHLPAPNIFIPTDLSLKIVQEKVKFPILLSRTSYSALWYKPDTMFSTPKACVKIDFNCPYAGNSPEAEVLSDIFTQLLMDYLNEYAYYAQVAGLYYGISHTDSGFQVTLFGYNHKLRILLETIIEKIATFTVKEDRFLVIKEMVTKEYQNFKYQQPYQQTMYYCSLILQDNTWPWIEGLEVLPRLQAEDLVKFVPVMLSRTFLEVYIAGNIENNEAESMVRHIEDTLFKCENSLCKPLFPSQHLTNRVVKLESGVNYFYPSECLNPNDENSALVHYIQVGRDDFKMNVKLQLFALIAKQSAFHQLRSVEQLGYITVLMQRNDSGIRGVQFIIQSTVKGPGDIEKRVEAFLKMFEEKLFEMSVEEFKGHVNALIDVKLEKHKNLREESSFYWREINDGTLRFDRRDFEVAELRQLTLPELVDFFNEYIKVGASRKRTLSVRVYGNLHSSDFKAEVSQSQPTNSLEVQSQPTKIDDICCFRKSQPLYGSFKGLSGQVKL	974

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g02604	974	Pfam	Peptidase M16 inactive domain	662	849	IPR007863	-
	Accr2g02604	974	Pfam	Peptidase M16 inactive domain	193	369	IPR007863	-
	Accr2g02604	974	Pfam	Insulinase (Peptidase family M16)	31	167	IPR011765	-
	Accr2g02604	974	FunFam	Insulin-degrading enzyme	499	725	-	-
	Accr2g02604	974	SUPERFAMILY	LuxS/MPP-like metallohydrolase	727	962	IPR011249	GO:0046872
	Accr2g02604	974	Gene3D	-	499	725	-	-
	Accr2g02604	974	Gene3D	-	244	470	-	-
	Accr2g02604	974	ProSitePatterns	Insulinase family, zinc-binding region signature.	51	74	IPR001431	GO:0004222\|GO:0006508
	Accr2g02604	974	SUPERFAMILY	LuxS/MPP-like metallohydrolase	7	238	IPR011249	GO:0046872
	Accr2g02604	974	Gene3D	-	2	238	-	-
	Accr2g02604	974	SUPERFAMILY	LuxS/MPP-like metallohydrolase	484	705	IPR011249	GO:0046872
	Accr2g02604	974	FunFam	nardilysin isoform X1	243	470	-	-
	Accr2g02604	974	FunFam	Insulin-degrading enzyme-like 1 peroxisomal	726	968	-	-
	Accr2g02604	974	Pfam	Middle or third domain of peptidase_M16	378	657	IPR032632	-
	Accr2g02604	974	FunFam	Putative insulin-degrading enzyme	1	241	-	-
	Accr2g02604	974	Gene3D	-	726	969	-	-
	Accr2g02604	974	PANTHER	NARDILYSIN	5	951	-	-
	Accr2g02604	974	SUPERFAMILY	LuxS/MPP-like metallohydrolase	246	483	IPR011249	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g02604	Accr-Chr2	61663280	61684888	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g02604	K01408		-	gmx:100788622	1646.71

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr2g02604	2	61663280	61684888	Accr2g02604	2	61663280	61684888	ECH