Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02487 ATGGATAATCAACAAACAAGTCATTTACCCAATGAGAAATTCACGTGGAGAATTGATAACTTCTCTAAGTTGACGTCCAAGAAGCTGTACTCCAAGACTGTCATTATGGGCGGTTATCCATGGCGGATTCTTATGTTTCCTAAAGGGAACAATGGGGGCTACTTGTCTTTATATTTGGATGCTGCGGATGCCCAGAGTTTACCTGCTGGTTGGTCCAGATTTGCACGTTTCAGCTTGGCTGTAATTAATCAAGTGTCCGCGAAGTACACAGTTAGAAAAGATACTCAACATTGCTTTAAATCAAGTGAGGGTGACTGGGGGTTCACATCATTTATGCCTCTAGGTGAACTTTATGACCCTAGTAAGGGTTATCTTGTAGGAGATACATGTATAATTAATGCTGAGGTTTCTACTCTCACGTCTGAAAAAGAGAATCAAGTAGATAAAGCATCTGACCCAGCATCCCTGGAATCTGGAGATCAAGCTGGACAAATGGAAGTGGAAATTCCACAGAAAGATCAAAAGCAAGGAGTGAAAACTTCACTTTCTGCATGTGTTTCCTTGGAGCCTGCTGAGCATAGAGGAACTCCTTCACTGCCTGCAGGACTGATTTCAAACCCAATGGATGAGCTTTCGGATTTCAGGGGTCTCGGGAAAATAGAAAATGCTTTTGTCCCACTCCTGGAGGAAGTATGTTCCAACCACCCATCACTCCTTGAATGTCAGCAGAAGAGAAGTGGACGATTTATCGAATGGGCATTCACAGCTCTGGGCAGAGTTCTGCACTTCCTGAAGACTAAAAGGGTGAAAGACATGAATGATGAGACTTGTGAACATCTTCAAATTTTGTGGGAGGAACTTGAGACATTTAGATTTGATTTGACTTGGCTGGAGCCTCATGTTCAATCAGCCTTAGGCATGAGAAACTACGTGCAGAAGGCAATGCAGGTGAAGAAGTTGAGGGATAATGTGAGTGCTCTGGAGATGGAAATGAAGAGGCTTAAAGCAAAGCTTGCTGCTGCAGAGATAGATCTTGAAATAGCAAAAAGAGACTTGGTGCTAGCAGAGGAAGGGTTCGAAGAGAGGGATTTGGATGCTGAACTTGGATATGTGAGACCACAGACTGTAAGATAA 1134 0.4321 MDNQQTSHLPNEKFTWRIDNFSKLTSKKLYSKTVIMGGYPWRILMFPKGNNGGYLSLYLDAADAQSLPAGWSRFARFSLAVINQVSAKYTVRKDTQHCFKSSEGDWGFTSFMPLGELYDPSKGYLVGDTCIINAEVSTLTSEKENQVDKASDPASLESGDQAGQMEVEIPQKDQKQGVKTSLSACVSLEPAEHRGTPSLPAGLISNPMDELSDFRGLGKIENAFVPLLEEVCSNHPSLLECQQKRSGRFIEWAFTALGRVLHFLKTKRVKDMNDETCEHLQILWEELETFRFDLTWLEPHVQSALGMRNYVQKAMQVKKLRDNVSALEMEMKRLKAKLAAAEIDLEIAKRDLVLAEEGFEERDLDAELGYVRPQTVR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02487 377 Coils Coil 317 351 - -
Accr2g02487 377 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Accr2g02487 377 MobiDBLite consensus disorder prediction 142 161 - -
Accr2g02487 377 FunFam Ubiquitin carboxyl-terminal hydrolase 13 9 142 - -
Accr2g02487 377 CDD MATH 13 136 IPR002083 GO:0005515
Accr2g02487 377 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 8 152 IPR008974 GO:0005515
Accr2g02487 377 SMART math_3 13 117 IPR002083 GO:0005515
Accr2g02487 377 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 344 - -
Accr2g02487 377 Pfam MATH domain 18 136 IPR002083 GO:0005515
Accr2g02487 377 SUPERFAMILY TRAF domain-like 10 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02487 Accr-Chr2 60330920 60332765 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02487 - - qsa:O6P43_005773 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02487 2 60330920 60332765 Accr2g02487 2 60330920 60332765 ECH