Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02471 ATGGCCTCCCTCCCTTCTTCCCCCTCCTCTGCTTTTGTTCTCTGCCTTCTCTTCCTTTCTCTTCCCTTCCTCTGCGCCCAGAAGCTCCCTTCTTCTTCCGGCTCCGGTCAGATTAACTCCAACTCTATTCTCGTCGCTCTTCTTGATTCCCATTATACTGAGCTCGCTGAGCTTGTCGAGAAAGCTCTTCTTCTCCAGAAACTTGAGGATACCGTTGGCGCCAACAATGTCACCATCTTCGCCCCTCGAAATGAAGCTCTTGAGCGCCAGCTTGACCCAGAGTTTAAGCGCTTCCTGCTTGAGCCCGGGAATCTCAGGTCCTTGCAGACTCTGCTCATGTATCACATTGTGCCCAAACGAATCGGTTCCAATGATTGGCCCGCTGAGAGTTCTGGAGCTGTTCCGCATCAGACCTTGTGCAATGACCACGTGCATTTGGCCAGCAAGGGTCCTGCCAGTAAGCTTGTTGGTTTGGCCGAGATCGTTCGCCCCGACGACGTTGTTCGTCCTGACGGTGTCATTCACGGCATTGAGCGGCTTTTGGTTCCGCGATCGGTGCAGGAGGATTTCAATCGACGACGGAATTTGCGAGACATATCGGCGGTGATCCCTGAGGGTGCGCCAGAGGTGGATCCCCGAACCCACCGGTTGAAGAAACCAGCTCCTGTACCTGCCGGGGCTCCTCCTGTGTTGCCCATTTACGACGCCATGGCCCCGGGTCCTTCTCTCGCTCCGGCACCGGCACCCGGACCCGGTGGTCCTCATGGTCATTTCAATGGTATGCGTCAGGTGAAAGACTTCATTCACACTCTGTTGCATTACGGTGGCTACAATGAAATGGCAGATATTCTGGTTAACTTGACATCTTTGGCCACCGAAATGGGAAGGTTGGTCTCAGAGGGTTATGTCCTGACGGTGTTGGCTCCCAATGACGAAGCCATGGCGAAGCTAACCACAGACCAATTGAGTGAACCGGGTGCGCCGGAGCAAATAATCTACTACCATATCATTCCGGAGTATCAGACAGAGGAGAGTATGTACAATGCTGTGAGGAGGTTTGGGAAAGTTCGGTACGACACACTGCGGTTGCCACACAAGGTTGTGGCTCAGGAGGCCGATGGGTCTGTGAAGTTTGGGCAAGGTGAAGGGTCTGCATATCTGTTTGATCCTGATATATATACGGATGGGAGAATTTCAGTACAGGGTATTGATGGAGTTCTTTTCCCGGCCGAAGAGGAGCCAAAGGCTGAGCGAAAAACAGTACCGGTCGTCAAAGTTGCTACCAAACCAAGGAGAGGGAAGTTGCTGGAAGTAGCTTGCAGCATGCTTGGAGCTTTCGGACGAGCCTGCTAA 1353 0.5314 MASLPSSPSSAFVLCLLFLSLPFLCAQKLPSSSGSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDTVGANNVTIFAPRNEALERQLDPEFKRFLLEPGNLRSLQTLLMYHIVPKRIGSNDWPAESSGAVPHQTLCNDHVHLASKGPASKLVGLAEIVRPDDVVRPDGVIHGIERLLVPRSVQEDFNRRRNLRDISAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHGHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPAEEEPKAERKTVPVVKVATKPRRGKLLEVACSMLGAFGRAC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02471 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 14 450 IPR044654 -
Accr2g02471 450 SMART fasc_3 305 410 IPR000782 -
Accr2g02471 450 SMART fasc_3 78 184 IPR000782 -
Accr2g02471 450 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Accr2g02471 450 Gene3D FAS1 domain 283 410 IPR036378 -
Accr2g02471 450 FunFam Fasciclin-like arabinogalactan protein 16 259 410 - -
Accr2g02471 450 Gene3D FAS1 domain 44 184 IPR036378 -
Accr2g02471 450 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Accr2g02471 450 SUPERFAMILY FAS1 domain 38 184 IPR036378 -
Accr2g02471 450 ProSiteProfiles FAS1/BIgH3 domain profile. 39 181 IPR000782 -
Accr2g02471 450 Pfam Fasciclin domain 289 409 IPR000782 -
Accr2g02471 450 Pfam Fasciclin domain 51 183 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02471 Accr-Chr2 60133327 60135960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02471 - - jre:109013503 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02471 2 60133327 60135960 Accr2g02471 2 60133327 60135960 ECH