Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02466 ATGGACAGTTTATTCTCGGATCACGACGATCTGTTCTGGGACCTCGATTCCCGCCTCCAACGTCGCTTCGTCCGAGACGAAGAGCCTGAATTGGCGAATGAGCCCCTCTACTTGGTTCTTTACGGGTGGTGGAAGGAAGTACAAGAGGATGCTGATCGAGTAGAAAATGTCCTATACACAGTATCATCGAACTCTGATTTTGAGCATGACTCAGAAATTTTGCTTCAGTTAAGGAAGGAAGACGATCGGGAGGAAACAATGAATAGTGATGTGGGATCTTCAGGCCGTCAATATGCGTTGGTTCCTGAAGGTTTGTGGTTGCGTGCTCTTAAAAGGTGTAGTGATAATAATAACGCAGTGAAGGATTTTGGGAGCCTCTTCTATGCAGATGATTATTTGCCAGATTTGTTTTCCTTGCAAGTTAGGATATTTGTTTCATGGGAAACAAATTCATTGGAGGCGAAGATAAGCCAGAAGGAAAATGGGGTTGATGTCTACATGAAAGCCCGCAATATTTTCAGCTCTGAATATAACCCAGTACAGATTTTGGACTTCTCAGGCCAGATAGCTCAGTTTTTCATAGACAATAATGAGGATTCTGGGCAACTTGAAAAAGGGGTTCTCCTGGAGCTGCAAGTTTATGGACTTTCTGATTCTATAAAGGTTAATGGAAGTGATGATATGTTTGTAGATGGACCTACAGTGGGATCTTTGGCTCATGGTGGCTCTGTTATGATGAATGGGACCACTCACAATGTGAATTCCAATATAACAACTATCAACTCCTTTCAAAGGAGCAGCTATAAATCAGTTGGTTCTTTGGGCTTGAAAGGATTAGAGAATCTTGGAAACACTTGTTTTATGAACAGTGCCATTCAATGTCTGGTTCACACCCCCAAGCTTGTTGACTATTTCCTGGGAGATTACCGGAAAGAAATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGGGATTTACTTAGAAAGTTGTGGTTTCCTGGCGCAAGGCCTGTGGCACCAAGAATGTTCAAGACGAAGCTTGCTAATTTTGCCCCCCAATTTAACGGTTGTAACCAGCATGATTCTCAAGAACTTCTCGCTTTTTTGTTGGATGGACTCCATGAAGACCTTAATCGTGTAAAGCGCAAACCATATCACGAAGTTAAAGATGAAGATGGTCGTCCCGATGAAGAAGTGGCAGAAGAATATTGGCATAATCACCTTGCTCGCAACGACTCCATAATAGTTGATTTGTGCCAAGGTCAGTTCCGTTCGACATTGGTATGCCCTGTTTGCAAGAAGGTTTCTATTACTTTTGACCCTTTTATGCACCTATCTTTGCCATTACCTTCAACAACAATGCGGACAATTACTTTGACTGTCCTGAGCACTGATGGAACTGCCTTGCCTTCCACATTTACCATAACATTACCCAAGAGTGGATTATTGAAGGATCTAATCAAGGCTTTAGGTGATGCATGTTCCTTAAGAGATGATGAGACACTCTTGGTAGCCGAGGTATACAAGAATCGCATCTTTCGTTGGTTGGAGGAACCATCTGATTCATTAGCATTGATTAGAGATCAGGACAAACTAGTTGCTTATCGATTGCCAAAAGATGAGGCTGGCACCTTGGTTGTTTTCACGAAGCAGTGCATTTCTGGGAGTGAGAAGTTGGTTGAAAGTTTGTTTGTCATTCCTGTTGTGGCAAGGTTGCCCAATGTTTCCTGTGGATATGACATTCATAGGGAGTTTCTGAAGTTAATTAGTCCATTTCAGATGCCCTCGGAAGATTTCTTAGATGAGCATGATAATGATATTGAAGTTAGTAAAGATAATGATTTGAGTGATGCCACTAGTTCTGCGTGCTTGGAAGGTGATTCAGATTCAGATTTGGAGGTTGACTTTAAATTCTACTTAATTGCACCACCATTTGGAATGGAGAATGTGGAGATAAAAATGAATGAACCCTTACCATTCCCACCGCTACCCAAAAGGTTGGAGGTTTCTGTCTTATGGTCAAATAAGATGATAGAAAAATATGATACATGCCTACTGAGCTCATTGCCTGAGGTTTTCAAGCCACAGTTATTCTCCAGGAGAACACAAGAATCTGTTTCTGTTTACAAGTGCCTTGAAGCATTCTTAAAAGAGGAGCCTCTTGGGCCAGATGACATGTGGTTCTGTCCTAAATGCAAAAAGCCTCAGCAAGCGACCAAAAAACTAGATCTTTGGAGATTACCTGAAATTCTTGTTGTTCATTTGAAGAGGTTTTCGTTCAGCCAATACTTCAAGAACAAGCTGGAAACATTCGTCAACTTCCCAATCAATGATTTGGACCTGTCAACGTATGTTGCCCATAAGAATAGCCAGTCCTCCCCCCATTATGAGTTGTATGCAATCAGCTGTCATTCTGGATTCTTGGGAGGAGGTCATTATACAGCATTTGTTCGTTATGGACATGATAAATGGTACGAGTTTGATGATAGCAGGGTTGTGCCTCTCAGTGAGGACATGGTAAAGACTTCTGCTGCTTACGTTCTTTTCTACAGGAAAGTTTAG 2580 0.4171 MDSLFSDHDDLFWDLDSRLQRRFVRDEEPELANEPLYLVLYGWWKEVQEDADRVENVLYTVSSNSDFEHDSEILLQLRKEDDREETMNSDVGSSGRQYALVPEGLWLRALKRCSDNNNAVKDFGSLFYADDYLPDLFSLQVRIFVSWETNSLEAKISQKENGVDVYMKARNIFSSEYNPVQILDFSGQIAQFFIDNNEDSGQLEKGVLLELQVYGLSDSIKVNGSDDMFVDGPTVGSLAHGGSVMMNGTTHNVNSNITTINSFQRSSYKSVGSLGLKGLENLGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEINYENPLGMNGELALAFGDLLRKLWFPGARPVAPRMFKTKLANFAPQFNGCNQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDEDGRPDEEVAEEYWHNHLARNDSIIVDLCQGQFRSTLVCPVCKKVSITFDPFMHLSLPLPSTTMRTITLTVLSTDGTALPSTFTITLPKSGLLKDLIKALGDACSLRDDETLLVAEVYKNRIFRWLEEPSDSLALIRDQDKLVAYRLPKDEAGTLVVFTKQCISGSEKLVESLFVIPVVARLPNVSCGYDIHREFLKLISPFQMPSEDFLDEHDNDIEVSKDNDLSDATSSACLEGDSDSDLEVDFKFYLIAPPFGMENVEIKMNEPLPFPPLPKRLEVSVLWSNKMIEKYDTCLLSSLPEVFKPQLFSRRTQESVSVYKCLEAFLKEEPLGPDDMWFCPKCKKPQQATKKLDLWRLPEILVVHLKRFSFSQYFKNKLETFVNFPINDLDLSTYVAHKNSQSSPHYELYAISCHSGFLGGGHYTAFVRYGHDKWYEFDDSRVVPLSEDMVKTSAAYVLFYRKV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02466 859 Pfam Ubiquitin carboxyl-terminal hydrolase 278 856 IPR001394 GO:0004843|GO:0016579
Accr2g02466 859 Gene3D Cysteine proteinases 557 859 - -
Accr2g02466 859 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 278 293 IPR018200 GO:0004843|GO:0006511
Accr2g02466 859 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 225 858 - -
Accr2g02466 859 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 802 819 IPR018200 GO:0004843|GO:0006511
Accr2g02466 859 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 277 859 IPR028889 -
Accr2g02466 859 SUPERFAMILY Cysteine proteinases 275 858 IPR038765 -
Accr2g02466 859 CDD Peptidase_C19R 687 857 - -
Accr2g02466 859 Gene3D Cysteine proteinases 261 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02466 Accr-Chr2 60092042 60099422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02466 713 859 Miscellaneous Gene Families AT4G31670 33.333 2.43e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02466 - K21343 gmx:100791802 1127.46