Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02454 ATGGATCCGGCGAAGACGCCGCTTGGCCAGATGTTACTGGACGAGATCACTCCAGTAGTCATGGTACTTTCTACTCCTTCTGTCGAAGAGGCCTGCCTCAAGAATGGCCTCAGCTTCCTTCACATGCTGACCCCATTCAGCTCTTTTAACAACATCGACGTGCCAGTAAGGACTGCCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGAGATTATATTATGCTTCGGCTGTCAGGAAGCCAGATTTGGAGGTAGCTAAAGAGCATTTGAGGCAAGTTATCACAGAGGCAGGAGAGAAACAGTTCAGTGAGCTGAGTTTGGATACACCAGAAATTAATCATGTACTTGAGAATTATCAATCTGGAAATGCACCATCCTGGCTTCACTTTTTTAACAAAGAACTTATCCGTGCGGTCTCCTTTTCAGAACATGAAACTTTTGATCATCCAGTGGCATGTCTTTTGGCTGTTTCTTCCAAGGATGAGCAACCAATTAACAGATTTATTGACCTATTTAACACCAACAAACTGCCTTCCCTTCTTAATGATGGTATGATGGATCCAAAGATTTTGAAGCATTATTTATTGGTGCATGATAATCAAGATGGCCTCGCTGACAGGGCAACTAAAATATTGACAGAAATGAGGAGTACGTTTGGTACTAGTGACTGTGCGTTGCTATGTATCAATTCTTCAACTGATGCTCCAGTCAAACATGAAGAGAACCCTTGGGCCTCATATTTGTGGCAGAATTCTGACGGCTCGCCTGGTCAACATCTTGGTTTCTTTCTTAACACTGATGACATCACTATGATTAAAGATCTTATGCAAGATTTCTCATCCAAGCACATCATTCCAAGCATGGAGCAAAAGATTCGTGTGCTCAACCAACAAGTTTCTGCAACACGAAAAGGCTTTAGAAACCAAATTAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGCACCGACTCTGCCAATGGTCCTATGTATGGTTTTAGCTCCACCGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAAGGATTATGAACTTGCCTTGTCAAATTATCGCTTAATTTCCACGGATTACAAACTTGATAAAGCTTGGAAACGCTATGCTGGTGTACAGGAAATGATGGGACTTGCGTACTTCATGTTGGACCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAATGCCTTTACCACTTATTTAAAACTTGGTTCATCTGGGCAGCAAAATGCCACACGGTGTGGTCTCTGGTGGATAGAAATGTTGAAGGCACGTGATCTATATAAGGAGGCAGCTCCAATTTATTTCCGCATTTGTGGTGAGGATATTCTACATTCTGCCGTGATGCTTGAACAAGCATCCTACTGCTACTCGTCCAAACCTTCAATGTTACGTAAATTTGGATTTCATCTTGTGCTTTCTGGGGATCGTTACAACAAGTGTGATCAGATCAAACATGCAATTCGAACATATAGAAGTGCTCTTTCTGTTTTTAGCAGAACTACATGGAGTCATATCAAAGATCATGTCCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTGTGATGTGGCTGTCAAGCATATGTTGGAAATTTTGGCATGTGGTCACCAGTCCAAGACAACTCAGGAATTATTTTTGAGCGACTTTCTTCAAATAGTTCAGAAAACAGGACAAACGTTTGAAGTATCAAGACTTCAGTTGCCTGTAATCAACACTTCCTCACTCAAGGTTGTCTTTGAAGACCACCGAACTTTTGGATCTGCTTCGGCTGCTAACACCAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATAATACCATCATTCTCTAGCACTAAGAGTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAGAATACAGAGAATCAAATGTTTGTGTGGCAGGAGAAGCTGTGAAGGTGAATGTCGAATTTAAAAACCCTCTTCAGATACCAATTCCCGTGTCTGGAGTTACCCTTATATGCAAGCATTTTCCTAGTGCTGTTGAAGTAAAATCTGATGAAAATATTTCTAGGAGGGAAAATGATAATGCGGGTAAATGTGAAGAGTTGACAGCCTGCAGGGACATGTGCTCTGAGAATTCCTTTTTGGCGTCAGAGGTTGACTTCTTATTAAGAGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGAGAAGAAGGTACTCTGGAAGTTATTGGTGTTAGGTGGAAATTGTTGGGTTCTATAGTCGGCTTTCACGACTTTGACTTTAATCATGTAAAGAAGAACACTTTAAAAGGAAAGGGGAAAGGGAAGCGCTCAACTAATGAAATCTTAAAGTTTTTAGTGATTAAGAGTATACCCAAGCTTCAAGGGTCCATTCACCCTTTTCCTGACAAGGCGCATGTGGGAGATTTATGGCACCTTGTTTTGGAGTTGAGAAACCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTTCTGAATATTGGAAATCAGGAAAGCATGAAGTCAGAGCTTCCTGCTTGCTTAATGAAGAAGGTAGATTCAGTACCAAGTGGTGCAAATGCTAATCCATTTAACAAGTCTGACACAGTCTTTATGTTTCCGGAGGGCACTACAGTTCAGGGCGCTACACCCTTCGCATGGCCTCTTTGGTTTAGGGCAGCTTTTCCTGGCAAAATCTCTCTATATATAAGCATATATTACGAAATTGGAGATATATCAAGTGTCATCAAATACCGCGTTCTTCGGTTACAATACAATCTACAGGTATTGCCATCATTGGATGTGTCTTTTCAAATTAGTCCTTCTTCATTGAGATTACAAGAGTTCCTTGTTCGAATGGATGTTGTTAACAAGACAGCCTCAGAAGATTTCTTAGTTAATCAGCTGTCCTCTATTGGGAGCAACTGGGAAATATCATTACTTCAGCCTGCTGATACTATTTTTCCTTCAAAATCATTGAAGGCTGGACAAGCAGTATCATGTTTCTTAACGCTAAAGAATTGCAGGAGCCTATTGGCTGCTAAGGACAATATATCTTTGGTTCCTAAGCCCGTCAAGAATGATATCATATTGGTTCCCCAAGGTAGTGAGGATTCAGTTTATGATGTGAGTAGTGAGCCTTTGGTGAATTTCCACCATTACGAAAAACAGCAGCAAGAATTACAGCACGAGGCACAGGGAGACCTGAACACTGTTGATTTTGTGCTGATCTCTCGACCATTGCAGAGTAACAGTGATGCTGGGTTTGTTGGACCTCCTGTTGTCATGTCTCATTATGCCTGCCATTGCAGTACTGCAAGCACAGGCCCTATTTCATGGCTATTGGATGGCCCTCGAACCTTACATCATAATTTCTCTGCATCATTTTGTGAAATAAATCTGAAGATGCTTCTTCACAATTCATCTGATGCCACTGCTTTTGTGCGCATCACCACCTCTGATTCTGCTGTCAATGGTGGGCATCTGAACAGTGCTAACACGGCTGTGTCAGAATCTTCTTCTGATGATCAAGGAGGGTGGCGTCATGTCACACCAGTGAATGAGGTAAAAGTGACATCAAACATTAGTGGGACACAGCCGGAAACACCTCTATCATTAGGAAGTGTCTCCCCATACATTTGGTCAGGATCGAGCTCGACCAAGATCCGCCTAGAGTCTATGTCCTCAGCTGAAATTCCTCTTCAGATCTGTATGTTCTCTCCTGGAATATATGATCTGTCAAATTACGTATTGCATTGGAATCTTCTCCTGGCTGAAGGTCAGGGAGATCAAGATGAAATGAGGCGACAGTCAGGAAAGTGCGTGGGATATACATACTACCTAACTGTGCTCCAATCCACATGA 3897 0.418 MDPAKTPLGQMLLDEITPVVMVLSTPSVEEACLKNGLSFLHMLTPFSSFNNIDVPVRTASDQPYRLQKFKLRLYYASAVRKPDLEVAKEHLRQVITEAGEKQFSELSLDTPEINHVLENYQSGNAPSWLHFFNKELIRAVSFSEHETFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGMMDPKILKHYLLVHDNQDGLADRATKILTEMRSTFGTSDCALLCINSSTDAPVKHEENPWASYLWQNSDGSPGQHLGFFLNTDDITMIKDLMQDFSSKHIIPSMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGTDSANGPMYGFSSTESQIRVLGDYAFMLKDYELALSNYRLISTDYKLDKAWKRYAGVQEMMGLAYFMLDQSRKEAEYCMENAFTTYLKLGSSGQQNATRCGLWWIEMLKARDLYKEAAPIYFRICGEDILHSAVMLEQASYCYSSKPSMLRKFGFHLVLSGDRYNKCDQIKHAIRTYRSALSVFSRTTWSHIKDHVHFHIGQWYASLGMCDVAVKHMLEILACGHQSKTTQELFLSDFLQIVQKTGQTFEVSRLQLPVINTSSLKVVFEDHRTFGSASAANTRESLWRSLEEEIIPSFSSTKSNWLELQSKLISKEYRESNVCVAGEAVKVNVEFKNPLQIPIPVSGVTLICKHFPSAVEVKSDENISRRENDNAGKCEELTACRDMCSENSFLASEVDFLLRGGETTMVQLSVTPREEGTLEVIGVRWKLLGSIVGFHDFDFNHVKKNTLKGKGKGKRSTNEILKFLVIKSIPKLQGSIHPFPDKAHVGDLWHLVLELRNPSEFPVKNLKMKISHPRFLNIGNQESMKSELPACLMKKVDSVPSGANANPFNKSDTVFMFPEGTTVQGATPFAWPLWFRAAFPGKISLYISIYYEIGDISSVIKYRVLRLQYNLQVLPSLDVSFQISPSSLRLQEFLVRMDVVNKTASEDFLVNQLSSIGSNWEISLLQPADTIFPSKSLKAGQAVSCFLTLKNCRSLLAAKDNISLVPKPVKNDIILVPQGSEDSVYDVSSEPLVNFHHYEKQQQELQHEAQGDLNTVDFVLISRPLQSNSDAGFVGPPVVMSHYACHCSTASTGPISWLLDGPRTLHHNFSASFCEINLKMLLHNSSDATAFVRITTSDSAVNGGHLNSANTAVSESSSDDQGGWRHVTPVNEVKVTSNISGTQPETPLSLGSVSPYIWSGSSSTKIRLESMSSAEIPLQICMFSPGIYDLSNYVLHWNLLLAEGQGDQDEMRRQSGKCVGYTYYLTVLQST 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02454 1298 Gene3D Tetratricopeptide repeat domain 341 574 IPR011990 GO:0005515
Accr2g02454 1298 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 186 520 IPR024420 -
Accr2g02454 1298 PANTHER TRANSPORT PROTEIN TRAPP 3 1297 IPR024420 -
Accr2g02454 1298 SUPERFAMILY TPR-like 431 550 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02454 Accr-Chr2 59962292 59978863 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02454 K20305 - gmx:100809666 1932.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02454 2 59962292 59978863 Accr2g02454 2 59962292 59978863 ECH