Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02422 ATGGCGGTCGCTTCTTCACTCTCTGCATTCACCAGAAGGTTGGCAGGGAAAGTAGCACTTGTAACCGGAGGAGCCAGCGGGATCGGCAAACGCACCGCCGAAGTGTTCGCCCAGCAGGGAGCCAAGGTGGTAATCGCGGACCTTCAAGATGACTTGGGCCAGTCCGTGGCCCAGTCGATGGGCCCATCAGACGGCCTATACGTCCACTGCGACGTCACCGATGAGGCCCAGGTCAAAAACGCCGTGGACACGGCCGTCAAAACCTTCGGGAAACTCGACATCATGTTCAACAACGCAGGAATAGCGGATCCAAACAAGGACCGAATCATAGACAACGAGAAGGCGGACTTCGAGCGCGTGCTGAGCGTGAACGTCACCGGCGTCTTCCTGGGAATCAAGCACGCGGCGCAGGCCATGATTCCTGCACGCAGCGGAAGCATAATTTCGACGGCGAGCATAAGCTCGTACGTTGGAGGGGCTGCTTCCTACGCGTACACCTGTTCCAAGCATGCGGTGGTTGGGCTGACTAAGAATGCTGCGGTAGAGTTAGGGCAGTTTGGGATAAGGGTGAACTGTTTATCGCCCTACGCCATGGCCACGCCGTTAGCTACCAAGTTTGTTGGGGTCAACGATGAAGAGCTTGAGAATACCATGAACTTGCTTGCTAATCTGAAGGGGGTGACCCTAAAAGTTGATGATGTGGCCAATGCAGCGCTGTATATGGCTAGTGATGAATCTAGGTATGTGAGTGGCCATAATTTGCTCATCGATGGCGGTTTCAGTATTGTTAACCCCTCCTTTAAGATGTTTTCGTACACTCCTGAGTCTTAA 831 0.5391 MAVASSLSAFTRRLAGKVALVTGGASGIGKRTAEVFAQQGAKVVIADLQDDLGQSVAQSMGPSDGLYVHCDVTDEAQVKNAVDTAVKTFGKLDIMFNNAGIADPNKDRIIDNEKADFERVLSVNVTGVFLGIKHAAQAMIPARSGSIISTASISSYVGGAASYAYTCSKHAVVGLTKNAAVELGQFGIRVNCLSPYAMATPLATKFVGVNDEELENTMNLLANLKGVTLKVDDVANAALYMASDESRYVSGHNLLIDGGFSIVNPSFKMFSYTPES 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02422 276 Pfam Enoyl-(Acyl carrier protein) reductase 23 261 - -
Accr2g02422 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Accr2g02422 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Accr2g02422 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 IPR002347 -
Accr2g02422 276 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 11 264 - -
Accr2g02422 276 Gene3D - 4 272 - -
Accr2g02422 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 263 IPR036291 -
Accr2g02422 276 FunFam Short-chain dehydrogenase reductase 3 265 - -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 139 155 IPR002347 -
Accr2g02422 276 PRINTS Glucose/ribitol dehydrogenase family signature 186 203 IPR002347 -
Accr2g02422 276 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 152 180 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02422 Accr-Chr2 59591601 59592703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02422 14 271 Acyl Lipid Metabolism Gene Families AT1G63380 31.618 7.18e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02422 - - gmx:100802915 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02422 2 59591601 59592703 Accr2g02422 2 59591601 59592703 ECH