Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02303 ATGCGGAGTTTTCTTTCGTTGCTATTGGCCTTCGCCACCGTTTTTGTGCCGGTATCAGTAGTTCACGGTGAGTTGTCCGGGGGTTTCCTCCCCCTGGAACGGACAATTCCTCTTAGCCGGCGAGGGGAGCTGGAAGCACTCAGAGCTCGCGACCGAGCTCGGCATGCTCGAATCTTGCAAGGTGTAGCAGGTGGTGTTGTCGATTTCTCAGTCAAAGGGATCTCTGATCCTTCCACTGTTGGGCTGTATTATACAAAAGTGAAGCTGGGCTCTCCTCCAAGAGAATTCAACGTCCAGATTGATACAGGAAGCGACATATTGTGGGTTAATTGCAATACTTGCGGTAATTGCCCTCAATCCAGTGAATTGGCGATTCAGCTCAACTTCTTTGATACAGCCAGCTCATCCACATCAGCGCTGCTTTCCTGCTCAGACCCAATATGCACTTCCTCAACTCAAAATGCAGCAACTGAATGCTCCCCTCAGATTAATCAATGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGGACATCAGGGTTTTATGTTTCTGATGCAATGTATTTTGATATGATCCTTGGGCAGTCAATGCTGGCTAATTCTTCAGCTAGAGTTGTTTTTGGGTGTAGTACCTATCAGTCTGGAGATTTGACTAAGGCAACTAAAGCAGTGGATGGAATTTTTGGGTTTGGCCCTGGTGCTTTATCCGTTATTTCACAATTATCATCACGAGGCATAACCCCCAAAGTATTTTCTCATTGTTTAAAAGGAGAGGGTAATGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGGAGCCAAGTCTTGTTTTTAGTCCACTTGTCCCGTCACAGCCTCATTACAACTTGAATCTTCAGAGCATTGGTGTTAATGGACGAATTCTCCCTATTAATCCTGCAGTTTTTGCAACATCTAACAACCGAGGAACTATAGTTGATACGGGTACAACCATGGCATACCTTGTTCAAGAAGCATACGATCCTTTGGTCAACGCTATAACCACTATTGTTTTACAGTCTGCCACTCCCATCATTTCAAAAGGAAGCCAGTGTTATTTGGTCTCAGCCAGTGTAGGTGATATATTTCCTTCAGTCAGTTTGATCTTTGCTGGTGGAGCATCCATGGTTGTAGAACCAGAACAGTACCTTCTACGTACTGATTTCATTGATGGTGTTCCAGAGTGGTGTATTGGTTTCCAGAAAGTGCAGGAAGGAGTTTCAATTTTAGGAGATCTTGTCCTAAAAGATAAGATATTTGTCTATGACTTAGCTCATCAACGAATTGGATGGGCTAATTATGATTGTTCTCTGTCTGTGAATGTTTCTGTCACCACAAGCAAGGATGAGTACGTCAGTGCGGGACAGGTGAGTGTGAGCAGTTCAGGGTCGGACACTTTCGCCAAGTTGCTTCCTTTAAGCATTGCAGTTTTCTTTATACACATAGCAGTTTTCTGGGAGTCCCGATTTTTGTGA 1491 0.4447 MRSFLSLLLAFATVFVPVSVVHGELSGGFLPLERTIPLSRRGELEALRARDRARHARILQGVAGGVVDFSVKGISDPSTVGLYYTKVKLGSPPREFNVQIDTGSDILWVNCNTCGNCPQSSELAIQLNFFDTASSSTSALLSCSDPICTSSTQNAATECSPQINQCSYTFQYGDGSGTSGFYVSDAMYFDMILGQSMLANSSARVVFGCSTYQSGDLTKATKAVDGIFGFGPGALSVISQLSSRGITPKVFSHCLKGEGNGGGILVLGEILEPSLVFSPLVPSQPHYNLNLQSIGVNGRILPINPAVFATSNNRGTIVDTGTTMAYLVQEAYDPLVNAITTIVLQSATPIISKGSQCYLVSASVGDIFPSVSLIFAGGASMVVEPEQYLLRTDFIDGVPEWCIGFQKVQEGVSILGDLVLKDKIFVYDLAHQRIGWANYDCSLSVNVSVTTSKDEYVSAGQVSVSSSGSDTFAKLLPLSIAVFFIHIAVFWESRFL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02303 496 Gene3D Acid Proteases 68 269 IPR021109 -
Accr2g02303 496 CDD pepsin_A_like_plant 83 441 IPR034161 -
Accr2g02303 496 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Accr2g02303 496 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Accr2g02303 496 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Accr2g02303 496 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Accr2g02303 496 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Accr2g02303 496 FunFam Aspartic proteinase-like protein 2 270 448 - -
Accr2g02303 496 PANTHER ASPARTYL PROTEASES 15 435 IPR001461 GO:0004190|GO:0006508
Accr2g02303 496 SUPERFAMILY Acid proteases 80 444 IPR021109 -
Accr2g02303 496 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Accr2g02303 496 FunFam Aspartic proteinase-like protein 2 66 269 - -
Accr2g02303 496 Gene3D Acid Proteases 270 448 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02303 Accr-Chr2 58247063 58252001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02303 80 442 Miscellaneous Gene Families AT1G44130 27.225 3.28e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02303 - - qsa:O6P43_006583 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02303 2 58247063 58252001 Accr5g02222 5 48521604 48525883 CCT
Accr2g02303 2 58247063 58252001 Accr2g02303 2 58247063 58252001 ECH