Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02157 ATGGCAGACAAGAAAAAGCGCCGTCGCGTGGAGCCATCCGACGACGGAGAACAGCTTCCCTTCAAGAATAAGCTTAAATCTGATTCGGTTATTCTCCAAATCCTCAAGGACTTCGGCAATTCCTCTTCTGATTCGAATTCTTCCTCTAAAGCCCTAACTCTTCAAGATCTCTCTCTTCCCTTCGCTTGCCGTGAGGTCTCCGACCTATCCCTCTCCTCTGTACAGTCCACCATCGAGTCCCTCGTTCTCAGTATTACTCGATCTATTCTTTCCGGTCAAGGCTTCTCCTTCGATGTTCCCTCTCGCTCCGCCGCTAACCAACTCTACGTACCCGAGCTCGATCGCATAGTCCTCAAAGACAAAACATCGCTACGCCCTTTCGCCAACATATCCACTGTTCGTAAAACCGCCATCACAGCTCGCATCGTTCAGCTTATCCACCAATTGTGCCTCAAGAATATCCATGTGACCAAGCGAGATCTCTTCTACACCGATGTCAAGCTGTTCCAGGACCAGACCCAATCTGATGCTGTGCTTGATGATGTCTCTTGTATGCTGGGTTGCACTCGTTCTAGTCTCAATGTAGTTGCCGCCGAGAAAGGGGTTGTTGTGGGTCGCCTTATTTTTAGTGACAATGGCGATATGATTGATTGTACGAAAATGGGTATGGGTGGGAAAGCCATCCCGCCTAATATTGATAGAGTAGGGGATATGCAGAGTGATGCTTTGTTCATACTCTTGGTTGAGAAGGATGCAGCCTATATGAGATTAGCTGAGGATAGATTTTACAATCGGTTTCCATGTATAATTGTGACAGCCAAGGGGCAGCCTGATGTTGCCACGAGGCTTTTCTTAAGGAAGATGAAGATGGAGTTGAAGCTGCCTGTGGTTGCCCTTGTGGATAGTGATCCTTACGGGTTAAAAATTCTGTCAGTTTATGGCTGTGGGTCGAAGAATATGTCCTATGATAGCGCGAATTTGACGACCCCTGACATAAAATGGCTTGGGGTTAGGCCGAGCGATCTGGATAAGTACAAGATACCTGATCAGTGTAGATTACCAATGACTGACCAGGATATTAAGACAGGGAAGGACTTGCTAGAGGAGGATTTTGTCAAGAAGAATCCTGGCTGGGTTGAAGAACTGACTCTGATGGTGAAAACTAAGCAGAAGGCGGAAATACAGGCTTTGAGTACGTTTGGCTTTCAGTATTTAACGGAAGTTTATTTACCGCTTAAATTGCAGCAGAAGGATTGGCTCTGA 1263 0.4663 MADKKKRRRVEPSDDGEQLPFKNKLKSDSVILQILKDFGNSSSDSNSSSKALTLQDLSLPFACREVSDLSLSSVQSTIESLVLSITRSILSGQGFSFDVPSRSAANQLYVPELDRIVLKDKTSLRPFANISTVRKTAITARIVQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVVALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPDQCRLPMTDQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLTEVYLPLKLQQKDWL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02157 420 Gene3D - 62 198 IPR036388 -
Accr2g02157 420 FunFam DNA topoisomerase 6 subunit A 199 420 - -
Accr2g02157 420 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g02157 420 SUPERFAMILY DNA topoisomerase IV, alpha subunit 133 420 IPR036078 GO:0003677|GO:0005694
Accr2g02157 420 Hamap Type 2 DNA topoisomerase 6 subunit A [top6A]. 68 420 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 Pfam Type IIB DNA topoisomerase 134 195 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Accr2g02157 420 Gene3D - 199 420 - -
Accr2g02157 420 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 72 419 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 FunFam DNA topoisomerase 6 subunit A 61 198 - -
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 245 262 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 269 290 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 158 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 301 317 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 190 205 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A family signature 172 189 IPR002815 GO:0003677|GO:0003918|GO:0005694
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 166 183 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 275 295 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 100 120 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 219 237 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 391 414 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Accr2g02157 420 CDD TOPRIM_TopoIIB_SPO 244 404 IPR034136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02157 Accr-Chr2 56513978 56515240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02157 K10878 - qsa:O6P43_010345 749.969