Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02075 ATGGAGAATTCATCTGATTTGCTTGGCTCAAAAGGCTTGATTAAAAAAGTTGAATTTGTGAGGATAATCATTCAGTGCTTATATGCATTAGGGTATAATAAGTCTGCATCATTGTTGGAATTGGAATCTGGTATTTCATTCAAGTCTGCAGAATTTCAGTTGCTTGAATCACAAATACTTAATGGGGATTGGGATGGTTGCGTCAGCACTCTTAATTTACTAAAGGATATGATTGATGAAACTAGAGAATCTACTCTGTTTCTTGTCTTCAGACAGTGTCTTCTTGAGTATTTGAATTGTGGCCAAGATTCTTTAGCTTTGAATGTGTTAAGGAAACAGGTCGCAACATTACATGTGGAGAAATGCAAAGTTCACAGCCTGGCCAATAGCTTGCTTTCCTTGAAGGATGCAGAGTTAGGTTTAATAGATGATACCATTGTCCATGATTTGCGAAGAAAGTTGTTAACTGACTTGGAAAAATTGCTCCCTCCTCCAATTACAGTACCTGAAAGAAGGCTGGAGCATTTAGTAGAAAGTACTCTTACTTCCTGGATTGATTCTTGTATGTATCATTGTTCATCAAATCCAATTTCACTTTATGAGGACCATTGTTGTAGCCATGATCTCATTCCTACTAAAACCACTCAGATCTTGACTGGGCATAAAAATGAAGTTTGGTTTGTGCAATTTTCTAATAATGGGGAGTACCTTGCCTCTTCATCTAATGATTGTACAGCAATCATATGGAAGGTGCTGGAAGACGGGAAACTGACACTGAAACACTCACTACAAGGTCACCAAAATCCAGTATCTTTTGTGGCATGGAGTCCTGATGACACTAAGTTGCTCACATGTGGGAATGCAGAAGTCTTGAAGCTGTGGGATGTTGAAACAGGTACATGCAAGCACACATTTGGGAGTCATGACTTTGTTGTGAGCTCATGTGCCTGGTTTCCCAACTCAAAGAATATTGTGTGTGGCAGCTCCGACGCTGAAAAGGGCATCTGCATGTGGGATTGTGATGGAAACGAGCTAAAAGCTTGGAGAGGAGTTAGGATGCCCAAAGTTCTAGACCTTGCTGTTACATCAGATGGGGAATACCTTATCACCATATTCATGGAAAAAGAGATCCGGATTTTGCATCTGGAAACGAATACTGAACGAGTCATCTCAGAGGAGCACCCGATCACATCCCTTTCGGTTTCAGGAGATGGCAAATTCTTCATTGTCAATCTAAACAGCCAGGAGATACATATGTGGGATGTTGATGGGAAATGGGACAAGCCATTGAGGTACCACGGTCATAAGCAATGCAAATATGTGATAAGATCATGCTTTGGTGGATTGAATAGCACATTCATTGCCAGTGGTAGTGAGAATTCACAGGTCTACATTTGGAACCGGAGGAACTCAAAGCCAATAGAGGTTTTATCTGGGCACACACTGACTGTGAATTGTGTGAGCTGGAACCCTAGAAGACCACAAATGCTGTCATCTGCAAGTGATGATTATACAATTCGTATATGGGGACCCAGCTCATTAAAAAAAATAATGAAACTTGAGTAG 1566 0.4061 MENSSDLLGSKGLIKKVEFVRIIIQCLYALGYNKSASLLELESGISFKSAEFQLLESQILNGDWDGCVSTLNLLKDMIDETRESTLFLVFRQCLLEYLNCGQDSLALNVLRKQVATLHVEKCKVHSLANSLLSLKDAELGLIDDTIVHDLRRKLLTDLEKLLPPPITVPERRLEHLVESTLTSWIDSCMYHCSSNPISLYEDHCCSHDLIPTKTTQILTGHKNEVWFVQFSNNGEYLASSSNDCTAIIWKVLEDGKLTLKHSLQGHQNPVSFVAWSPDDTKLLTCGNAEVLKLWDVETGTCKHTFGSHDFVVSSCAWFPNSKNIVCGSSDAEKGICMWDCDGNELKAWRGVRMPKVLDLAVTSDGEYLITIFMEKEIRILHLETNTERVISEEHPITSLSVSGDGKFFIVNLNSQEIHMWDVDGKWDKPLRYHGHKQCKYVIRSCFGGLNSTFIASGSENSQVYIWNRRNSKPIEVLSGHTLTVNCVSWNPRRPQMLSSASDDYTIRIWGPSSLKKIMKLE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02075 521 Gene3D - 210 513 IPR015943 GO:0005515
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 477 509 - -
Accr2g02075 521 CDD WD40 215 509 - -
Accr2g02075 521 PANTHER WD REPEAT PROTEIN 26-RELATED 2 512 - -
Accr2g02075 521 SUPERFAMILY WD40 repeat-like 208 509 IPR036322 GO:0005515
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 477 519 IPR001680 GO:0005515
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 304 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 256 295 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 211 250 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 298 339 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 383 421 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 425 467 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 470 510 IPR001680 GO:0005515
Accr2g02075 521 SMART WD40_4 341 381 IPR001680 GO:0005515
Accr2g02075 521 FunFam WD repeat-containing protein 26 homolog 205 510 - -
Accr2g02075 521 ProSiteProfiles LIS1 homology (LisH) motif profile. 15 47 IPR006594 GO:0005515
Accr2g02075 521 Pfam WD domain, G-beta repeat 214 250 IPR001680 GO:0005515
Accr2g02075 521 Pfam WD domain, G-beta repeat 259 295 IPR001680 GO:0005515
Accr2g02075 521 Pfam WD domain, G-beta repeat 432 467 IPR001680 GO:0005515
Accr2g02075 521 Pfam WD domain, G-beta repeat 299 339 IPR001680 GO:0005515
Accr2g02075 521 Pfam WD domain, G-beta repeat 472 509 IPR001680 GO:0005515
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 299 - -
Accr2g02075 521 SMART ctlh 48 105 IPR006595 -
Accr2g02075 521 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 48 105 IPR006595 -
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats profile. 218 251 IPR001680 GO:0005515
Accr2g02075 521 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 218 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02075 Accr-Chr2 55755876 55758526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02075 208 374 Miscellaneous Gene Families AT5G08390 29.940 5.67e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02075 K22382 - gmx:100818922 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02075 2 55755876 55758526 Accr2g02075 2 55755876 55758526 ECH