Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02058 ATGGGTGATAGCGAAGCAGTTACTGAAAATTCTGCAGCTGTAAGCTTCAATTCTGCCAGCTATACTTCAAGTGGCCAAGCTGATGCCATGCCAAATCCTATTCCTGAGGCAGTTTCTACTGCCGCTGACTCTAGTTCAGAAGCTCAGCTGGCTAGTGCAACATTTGAACCGAATTGTTCTGATTCTGGAGATGGGAATGCTTACAGGGGGGATCCTAATTCAGTTCAACAGCAGGCCCAGTTCAACACGACGGATGGAACCATGCAAACTGATGCTAATCAGAGTGCCAGTGGGAACGCAGTCACAGGATATCCTCAAGTGCCTGACTATAATTCATCTGTGAATGGAACAGTGGCGAATGCCACAGGACTCGAGAATGGGAATATGTTGGAGAATATTGATGGATCGACAGCTGATGAGAAACAGTTTGCAGATGGTTATGCTGCAATGTCTGCTGAGGAAGATAGGCTGTGGAATATTGTAAGAGCTAATTCTTTAGATTTTAATGCTTGGACTTCCCTGATCGAGGAAACAGAGAAAGTGACAGAGAACAACATTCTGAAGATCCGAAAAGTTTATGATGCTTTTCTAGCCGAATTTCCATTGTGCTATGGATATTGGAAGAAGTATGCTGACCATGAGGCTCGCCTTGGTTCTATTGATAAAGTTGTTGAAGTTTATGAGCGGGCAGTTCAAGGAGTTACATATTCAGTGGATATGTGGCTGCATTATTGCATATTTGCTATAAGCACATATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCATTATGGGATAAATACATTGAATACGAGTACATGCAGCAAGATTGGGCCCGTCTTGCCATGATCTACACCAGAATATTAGAGAATCCAAACCAACAATTAGATCGCTATTTCAGCAGCTTTAAGGAGTTAGCTGGAAATAGGCCTTTATCAGAATTGCGTTCTGCTGATGAGGCAGGAGGAGGAGGCGCAGTTTCAGAGGATGGTGCCCAAGCCAAGGAGGGAGAGGTTCATCCTGATGGTGCCGAAAATCCTCCTAAACCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATGTCGCCATTAGAGAAGAGTTATATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATTAGGAGGCCCTACTTTCATGTACGGCCCCTCAATGTTGCAGAGCTTGAGAATTGGCATAATTATCTGGATTTTATAGAAAGGGAAGGTGACTTCAGCAAGATTGTAAAGTTGTATGAAAGATGTGTCATTGCATGTGCCAATTATCCGGAGTACTGGATTCGGTATTTATTGTGTATGGAGGCCAGTGGGAGCATGGATCTTGCAAATAATGTACTCGCTCGAGCAACACAGGTCTTTGTGAAGAGACAACCAGAGATACATCTTTTTTCTGCACGTTTTAAGGAGCAGAATGGGGATATAGCTGGTGCCCGAGCGGCCTATCAACTGGTGCATACCGAAATTTCTCCTGGTCTACTTGAAGCTATAATCAGGCACGCAAATATGGAAAATAGACTGGGTAAGTTGGTGGACGCCTACTCTTTATATGAACAAGCTATTGCCATTGAAAAAGGAAAAGAACATTCACCGACATTACCAATGTTGTTTGCTCAGTATTCTCGGTTTGTATATCTGGTTTCTGGGAATGCTGAAAAGGCTAGGGAGATTCTAGTCGAGGGGCTTGAGCATGTTCAATCACCAAGGCCAATACTCGAAGCTTTGTTACATTTTGAGGCTATTCGACCCCTACCAAAGAAAGTTGACATTGATTTTCTAGATTCTTTGGTAACAAAATCCATTGTTCCCAGCCCTGAGAACACAAATACTGCAAGTGCAACTGATAGGGAGGAACTTTCTAGCATTTTTCTGGAGTTCTTAAATGTTTTTGGAGATGTTCAATCCATCAAGAGAGCTGAGGATAGGCATGCCAAACTCTTCTTGCCTCATAGGAGCATGTCAGAGATGAGAAAGCGTCATGCAGAGGATTTTCTCACTTCAGATAAAGCAAAAATGGCGAGATCTTACTCTGTTCCGTCACCTGCCCAATCTTCAATGGGCACATATCCAAATGCACAGAGCCAGTGGGCTTATGGAGTGCAACCTCAAACTTGGCCACCAGCCACACAATCACAGGGACAACAATGGGCTGCTGGTTACACCCAGCAGGGCACATACGGGGCTTACCCTGGATACGGGGGCACTTATGCTAACCCACAGTTGCCTGCGTCAGTTCCACAAAGTACCGCATACGCAGCAGCCTACCCACCTGCTTATCCTGTACAGGCTCCAGCTTCTCAACCAAGTTATGTACAACCAGCTGCGGCTCCTGCGGTGCAACCAGCTGCAGCTCCTCAGACGTATTATGGGAGTGGCTATTACTGA 2469 0.4451 MGDSEAVTENSAAVSFNSASYTSSGQADAMPNPIPEAVSTAADSSSEAQLASATFEPNCSDSGDGNAYRGDPNSVQQQAQFNTTDGTMQTDANQSASGNAVTGYPQVPDYNSSVNGTVANATGLENGNMLENIDGSTADEKQFADGYAAMSAEEDRLWNIVRANSLDFNAWTSLIEETEKVTENNILKIRKVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFSSFKELAGNRPLSELRSADEAGGGGAVSEDGAQAKEGEVHPDGAENPPKPVSAGLTEAEELEKYVAIREELYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFIEREGDFSKIVKLYERCVIACANYPEYWIRYLLCMEASGSMDLANNVLARATQVFVKRQPEIHLFSARFKEQNGDIAGARAAYQLVHTEISPGLLEAIIRHANMENRLGKLVDAYSLYEQAIAIEKGKEHSPTLPMLFAQYSRFVYLVSGNAEKAREILVEGLEHVQSPRPILEALLHFEAIRPLPKKVDIDFLDSLVTKSIVPSPENTNTASATDREELSSIFLEFLNVFGDVQSIKRAEDRHAKLFLPHRSMSEMRKRHAEDFLTSDKAKMARSYSVPSPAQSSMGTYPNAQSQWAYGVQPQTWPPATQSQGQQWAAGYTQQGTYGAYPGYGGTYANPQLPASVPQSTAYAAAYPPAYPVQAPASQPSYVQPAAAPAVQPAAAPQTYYGSGYY 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02058 822 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 139 816 - -
Accr2g02058 822 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 411 703 - -
Accr2g02058 822 MobiDBLite consensus disorder prediction 1 29 - -
Accr2g02058 822 Gene3D Tetratricopeptide repeat domain 412 708 IPR011990 GO:0005515
Accr2g02058 822 MobiDBLite consensus disorder prediction 38 73 - -
Accr2g02058 822 MobiDBLite consensus disorder prediction 1 73 - -
Accr2g02058 822 SUPERFAMILY TPR-like 376 679 IPR011990 GO:0005515
Accr2g02058 822 Gene3D Tetratricopeptide repeat domain 159 325 IPR011990 GO:0005515
Accr2g02058 822 SMART hat_new_1 432 464 IPR003107 GO:0006396
Accr2g02058 822 SMART hat_new_1 218 250 IPR003107 GO:0006396
Accr2g02058 822 SMART hat_new_1 184 216 IPR003107 GO:0006396
Accr2g02058 822 SMART hat_new_1 253 288 IPR003107 GO:0006396
Accr2g02058 822 FunFam Putative pre-mrna-processing factor 39 159 329 - -
Accr2g02058 822 SUPERFAMILY TPR-like 161 320 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02058 Accr-Chr2 55565140 55572512 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02058 K13217 - gmx:100787373 1221.84