Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02013 ATGGACAAGTTGAACCTAGCTCAGCTGGGTGAGAAGCTGAAGACAAGTGGTGCTCAAATGAGTCGGATTGTTAGTGACAAAATGAAGGAAATTTTGCAAACCCCAACTCCTGAATCAAAGATGGTTGACGAAGCAACATCGGAGATGTTAGAGGAACCCAACTGGGGCATGAATTTGAGGATATGTGCCATGATCAATAGTGGAGAGTTTAATGGATCCGAGATTGTGAAGGCTATAAAGAAGAAGATTTCAAGCAAGAACCCAGTGAGCCAGATGCTCAGCCTTGACTTGCTTGAAGCCTGTACTATGAATTGTGAGAAAGTGTTTTCTGAGGTGGCATCAGAGAAGGTGCTTGAAGATATGGTTCGAATGATTGATAATCCACAAACAGATCATCAGATTAGAAGAAGGGCTTTGCAATTGATCAGGGCTTGGGGAGAGTCAGAGGATCTTGCCTATCTACCAGTGTTTCGTCAAACCTATATGAGTCTGAAAGGAAGAAATATGCCTCTGGAGACAGATGGAGGAAATTCGGCGCATGTTCCATATTCCTTGGAATCTCATGTACCTGAAGATTCATTAGATCCTCCTGAAAGTTATCCTGTTCCTGTTGCTCCATTGCATGCGATGAGTGGATCTGCTTTGCCTTCTAATCCCAGGAGCCTATCAGTTGAAGAAAAGAAGGAGCATCTTGTCATTGCTCGAAACAGTCTTGAATTACTCTCTACCATATTAAATTCTGGAGCAGAGCCAAAATTGTTAAAGGAAGACGTGACTGTGAGCTTGTTGGAGAGGTGCATGCAGTCACTGTCTATCATGAAGGTGATTGTGGAAAGCACCACTGACGATGAGGGAACACTTTTTGAGGCTTTGAACCTTAATGATGAGCTACAACAGGTAGTTTCCAAGTACGAGGAGTTGGAAGCTGCCCAAGATTCTGGAGCTCAACCACCCCTAGTTGCTGATGCCGCAGAGCATGCTGCAAAAGCTGTTCAAAATCCCATGGCACCACCTGAAAGCTTTTTAGGCGATGAATCTGTTGAGTCAGATGCTGCTGAGAGACTCCAAAGGAAGGCACTTAATAAGCCTGACGCTTCTGAGGCCAATTCTACTGCTGTTGTTGATAGTCACTGTGAGGCCAACACAACGAATGCAAAAGAGAAGGATGCTGAATTGGGCCGCAAGAGAAATGCGGAATGA 1200 0.4458 MDKLNLAQLGEKLKTSGAQMSRIVSDKMKEILQTPTPESKMVDEATSEMLEEPNWGMNLRICAMINSGEFNGSEIVKAIKKKISSKNPVSQMLSLDLLEACTMNCEKVFSEVASEKVLEDMVRMIDNPQTDHQIRRRALQLIRAWGESEDLAYLPVFRQTYMSLKGRNMPLETDGGNSAHVPYSLESHVPEDSLDPPESYPVPVAPLHAMSGSALPSNPRSLSVEEKKEHLVIARNSLELLSTILNSGAEPKLLKEDVTVSLLERCMQSLSIMKVIVESTTDDEGTLFEALNLNDELQQVVSKYEELEAAQDSGAQPPLVADAAEHAAKAVQNPMAPPESFLGDESVESDAAERLQRKALNKPDASEANSTAVVDSHCEANTTNAKEKDAELGRKRNAE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02013 399 Coils Coil 290 310 - -
Accr2g02013 399 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Accr2g02013 399 MobiDBLite consensus disorder prediction 347 361 - -
Accr2g02013 399 MobiDBLite consensus disorder prediction 328 399 - -
Accr2g02013 399 Gene3D - 216 311 IPR038425 -
Accr2g02013 399 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Accr2g02013 399 Gene3D - 29 182 IPR008942 -
Accr2g02013 399 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Accr2g02013 399 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Accr2g02013 399 Pfam VHS domain 38 147 IPR002014 GO:0035091|GO:0043130
Accr2g02013 399 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Accr2g02013 399 CDD VHS 39 165 - -
Accr2g02013 399 MobiDBLite consensus disorder prediction 363 380 - -
Accr2g02013 399 PANTHER TOM1-LIKE PROTEIN 1 1 379 IPR044836 GO:0035091|GO:0043130|GO:0043328
Accr2g02013 399 SUPERFAMILY GAT-like domain 195 308 - -
Accr2g02013 399 MobiDBLite consensus disorder prediction 381 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02013 Accr-Chr2 55001745 55004107 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02013 - - gmx:100777747 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02013 2 55001745 55004107 Accr2g02013 2 55001745 55004107 ECH