Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01910 ATGGGTTGGAAAGCAGCCGAGAAACTAATTAGGCACTGGAAGATTCTCAGAGGGGAAAATGTAATGATTATATGGGGCATGGAACGAGGCAAGATGGGGATTATTAAGCGCATGATTCACTCTCGGAATCGTGCGATTGTTGAGGCCAAAAATATGAATGAATTCAGCCACCGAGGTCTATATTTCTCAAGTATGCCTGAAACAATCCTGGTCCAGGCTCGAGACCCTGCTAAACTGAATATGGAAATAGAAAATGCTATCAATGAGAAAAAATTAGATGATACCTGGAAGCTATTTGAGCAGCATATGCACATGGATGGCTTTCCTAGAAAATTTATTCTCAACAAGCTTCTAACCACTTTTGTGGAAAGCCTTGATATACAATGGCTAGAAAAAGCTTATGGGTTGGTAGAAAAGGCTATTGAGGAAGGTAAACAGAACTTGTTAGAGAAGGAAGTACTCATGTATCTCTGTTTTGGTCTTGCCAAAGCTGGATTACCAGTTCCGGCATCAACTGTCTTGAGAAAGATGATAAATATGGAGCAATTTCCCCCAGTCACTGCATGGTCTGCAGTTTTGGCCCACATGTCACAAACAGCAGATGGAAGTTATCTTGCTGCTGAGTTGATTCTTGAAATAAGTTATTTGTTTCAGAACAATAGAGTGGATCCACGCAAAAAGAGCAATTCACCTTTGGTAGCTATGAAGCCTGATACTACTGCTTTTAACATTGCTTTGGCAGGGTGTCTCCTATTCGAGACTACAAGGAAAGCAGAGCAGCTTCTAGATGTGATGCCTCGAATTGGTGTCAAGGCTGATGCAAACTTACTTATAATAATGGCACATGTATATGAGAAGAATGGGCGCAGAGAAGAGCTTAAGAAACTGCGAAGGCACATAGAGGAAGCAGCCAATCTTACTGATATTCAGTTCCGCCAATTCTTTAATTGTTTGCTCTCATGCCATTTAAAATTTGGGGATCTAGATTCAATATCAAACATGGTTTTGGAAATGCTAAGGAAATCAAAGGAGGCAAAAAATTCTATTGCAGCTGCTAAATTTATAAGTGATTCAACTGAAGTTAGTCATAAATATTCTCTTGGACTTGCTTCTACGCGAAGTTTGAGTGATGGTAAGGATTCAAACTGTTTAGAATATGACAAACCAATGAGAAACACCATCCTATCTTATGAAGAGTTCTCCAGAGATCGGAATTTCTTGAAAATTGAAGCAGAGTCAAAGGCTGTTCTTGGTTCTCTGTTAGCCAAGTTGCAGACACAGGTTGACTTGATTACAACAAAACATGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAAGCTTTCCTAGAAGTTGGCAAGACCAAGGATTTGGCAGAGTTTCTAATCCACACAGAAAGAGAAGATTCTCCGCTTTCCAATGATAGTTCAATATTGGTTCATGTCATTAATTCATGTATTGCACTTGGATGGTTGGATCAAGCACATGACCTTCTTGATGAGATGCGGATAGCTGGAATAAAAACTGGCTCATCTGTGTATGCCTCTCTCTTGAAAGCCTATTGTCAAGCAAATAAGGCTGCAGAAGTCACTTCACTTTTAAGGGATGCTAGGAAGGATGGTATCCAGCTGGACTCTGGTTCTTATGAGGCGATGATCCAATCCAGGGTGCTTCAGGAGGATACAAAGGGGGCGCTCTCTTTATTCAAAGAGATGAAAATGGCGAAAATTCCAAAAGTTGGACAGCAAGACTCTATTTTACAAACTAAAAGTCATGCACAGAAAGATGAATCTGGTTTGATGATGAATCTGTTGCAGGAAATGAAAGAAGGACAGAAAGTGGATTATGGGGTTCATGACTGGAATAATGTAATCCATTTTTTCTGTAAGAAGAGGCTGATGAAAGATGCTGAAAAGGCTCTGAAGAAGATGAGGAGCCTAGGCCACACACCAAATGCACAAACTTTCCATTCTATGGTCACTGGGTATGCTGCTATTGGAGGGAACTATCTGGAGGTAACAGAGCTCTGGGGTGAGATGAAATCTCTTGCTTCTTCGGTCTCAATGAAGTTTGATCAAGAGCTTCTTGATTCAGTGCTGTATACGTTTGTGAGGGGTGGATTCTTTAGTCGAGCCAATGAAGTTGTCGCGATGATGGAAAAGGCAAACATGTTTATTGACAAGTACAAGTATCGGATGCTTTTCTTGAAGTATCATAAAACATTATATAAAGGCAAGGCTCCGAAGTTTCAGACAGTAGCCCAGTTAAACAAGAGGGAAGCAGCCCTGGCTTTTAAAAAATGGATTGGGTTGAGTTAA 2328 0.4042 MGWKAAEKLIRHWKILRGENVMIIWGMERGKMGIIKRMIHSRNRAIVEAKNMNEFSHRGLYFSSMPETILVQARDPAKLNMEIENAINEKKLDDTWKLFEQHMHMDGFPRKFILNKLLTTFVESLDIQWLEKAYGLVEKAIEEGKQNLLEKEVLMYLCFGLAKAGLPVPASTVLRKMINMEQFPPVTAWSAVLAHMSQTADGSYLAAELILEISYLFQNNRVDPRKKSNSPLVAMKPDTTAFNIALAGCLLFETTRKAEQLLDVMPRIGVKADANLLIIMAHVYEKNGRREELKKLRRHIEEAANLTDIQFRQFFNCLLSCHLKFGDLDSISNMVLEMLRKSKEAKNSIAAAKFISDSTEVSHKYSLGLASTRSLSDGKDSNCLEYDKPMRNTILSYEEFSRDRNFLKIEAESKAVLGSLLAKLQTQVDLITTKHGILQPTESIYVKLVKAFLEVGKTKDLAEFLIHTEREDSPLSNDSSILVHVINSCIALGWLDQAHDLLDEMRIAGIKTGSSVYASLLKAYCQANKAAEVTSLLRDARKDGIQLDSGSYEAMIQSRVLQEDTKGALSLFKEMKMAKIPKVGQQDSILQTKSHAQKDESGLMMNLLQEMKEGQKVDYGVHDWNNVIHFFCKKRLMKDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGNYLEVTELWGEMKSLASSVSMKFDQELLDSVLYTFVRGGFFSRANEVVAMMEKANMFIDKYKYRMLFLKYHKTLYKGKAPKFQTVAQLNKREAALAFKKWIGLS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01910 775 Coils Coil 286 306 - -
Accr2g01910 775 Gene3D Tetratricopeptide repeat domain 76 372 IPR011990 GO:0005515
Accr2g01910 775 CDD KOW_RPL26 18 52 IPR041988 GO:0003723
Accr2g01910 775 Gene3D Tetratricopeptide repeat domain 428 583 IPR011990 GO:0005515
Accr2g01910 775 Gene3D - 4 71 IPR014722 -
Accr2g01910 775 Gene3D Tetratricopeptide repeat domain 587 769 IPR011990 GO:0005515
Accr2g01910 775 Pfam PPR repeat 485 510 IPR002885 -
Accr2g01910 775 NCBIfam pentatricopeptide repeat 624 656 IPR002885 -
Accr2g01910 775 PANTHER BNAC05G43320D PROTEIN 55 775 - -
Accr2g01910 775 Pfam Pentatricopeptide repeat domain 535 580 IPR002885 -
Accr2g01910 775 SUPERFAMILY Translation proteins SH3-like domain 10 58 IPR008991 -
Accr2g01910 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 620 654 IPR002885 -
Accr2g01910 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Accr2g01910 775 Pfam PPR repeat family 622 667 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01910 Accr-Chr2 53290551 53293655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01910 481 737 Miscellaneous Gene Families AT4G11690 21.622 7.39e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01910 - - gmx:102661989 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01910 2 53290551 53293655 Accr2g01910 2 53290551 53293655 ECH