Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01909 ATGGCGTTCAGAGTGATGATGATGATGCAGGGTCTAGCTGTGATTCTGGTGGCTACTACTAATCTTATGTGGACGCAAACTGCTGCACAATCAAGCTGCACAAGTGCATTCACAAGCATGAGCCCCTGCCTTAACTATATAACGGGAAGTTCGTCATCCCCTTCGTCTTCTTGTTGCTCACAACTCTCCAGTGTGGTTCAATCCTCACCACAGTGCCTCTGCTCTCTTCTTAATGGCGGCGGTTCTTCTCTGGGAATCACCATTAACCAAACTCTTGCTCTGTCTCTCCCTGGTGCCTGCAAAGTCCAAACTCCACCCGTCAGCCAATGCAAAGCAGCTGGCAATGCACCAACCAAAGATTCAAATGCTCCAGCAGGATCTCCCGTAGGTTCACCTGAAGGCTCCATTGCACCTTCAGCCGCAGACATTCCTAATACAGGTGCAGGCTCTAAGACAGTACCTACACTAGACGGTGGCTCATCAGATGGAAGCACCATGAGAATTTCCTTCTACTCAATTTTCTCACTCCTCCTCGCTGCGTCCTTCGTCTCTGCTCTCACTTATTGA 567 0.4956 MAFRVMMMMQGLAVILVATTNLMWTQTAAQSSCTSAFTSMSPCLNYITGSSSSPSSSCCSQLSSVVQSSPQCLCSLLNGGGSSLGITINQTLALSLPGACKVQTPPVSQCKAAGNAPTKDSNAPAGSPVGSPEGSIAPSAADIPNTGAGSKTVPTLDGGSSDGSTMRISFYSIFSLLLAASFVSALTY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01909 188 SMART aai_6 33 110 IPR016140 -
Accr2g01909 188 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Accr2g01909 188 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Accr2g01909 188 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Accr2g01909 188 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 161 IPR043325 -
Accr2g01909 188 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 30 109 - -
Accr2g01909 188 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 111 IPR036312 -
Accr2g01909 188 MobiDBLite consensus disorder prediction 111 125 - -
Accr2g01909 188 CDD AAI_LTSS 40 102 - -
Accr2g01909 188 MobiDBLite consensus disorder prediction 111 161 - -
Accr2g01909 188 Gene3D - 30 110 IPR036312 -
Accr2g01909 188 MobiDBLite consensus disorder prediction 145 161 - -
Accr2g01909 188 Pfam Probable lipid transfer 14 110 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01909 Accr-Chr2 53286654 53287483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01909 6 188 Lipid Metabolism Gene Families AT3G22600 50.538 1.30e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01909 - - gmx:100306151 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01909 2 53286654 53287483 Accr2g01909 2 53286654 53287483 ECH