Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01461 ATGCGCTACTCCGCCTCTTTTCAGGGCTTTATCATCAGAACCACCACTTCTGCTTCAACCACCATGTCCCTCAGGGGTCCCCTTTTCCTCTTACCACATAGAGCTCGAAGACTCTCGCTTCTATCCATTTCCTTGAGACATCCTTCACTTGGCTTGAGAAATTTTCATGCACACTCAAAGATAAGGTCTCACATAGGAGATATGGGCTTAGTGGCGCCTTCTAGGACAACTGAGGTGGATTGGAAGGAGAGGCATGTTGTGGGCTTCAGGCGGAGGAACATTGCTTTGCTATTTTGGCATCAGCAGAGCTCCAGTTACGGTCGTTTTGCTTACCAGGATGTGTCTAGTGATGATTCTGATTTGGAATCGGGGGCTCCTCAGCAACAGAGGGGTGGTTCATCCCTTGATAACATTGACGAGTGGAGATGGAAGCTGACCATGCTTCTTCGCAGCAAAGATGAGCGAGAAGTAATTTCGAGGGATAAAAAGGACAGACGTGATTTTGAGCATCTCTCAGCTTTAGCATCTAGGATGGGTTTATATAGCCGGCTATATTCAAAAGTAGTTGTCTTTAGCAAGGAACCTCTGCCAAATTACAGATCTGATCTGGATGATAAGCGTCCACAGAGGGAGGTTGTCATACCTTTTCGTGTTCATGGAGAAGTAAATTCTCTTCTCAATGCTCACCTCTCTAAAAAGTCTAGAAGCTTTGGAGGCATTGTAGATACATCCTTCCATAGATCAAGCAGCGCTGGCATTCCTGCGGACGAAGGAATTCTTGAAGAGCCAGAGCCCTTAGCACAGAATAATGTTGTCAGGGAGAAAATCCTTCGACGAAGAAGTTTGCAATTGCGTTATCAACAAGAAGAATGGCAGGAGTCTCCTGAAGGACAAAAGATGCTTGAATTTCGTAGATCTCTTCCTGCATTCAAGGCGAAGGATGCATTATTGAAAGCCATTTCAGAGAACCAGGTTGTTGTGGTCTCAGGTGAAACTGGTTGCGGTAAGACCACGCAACTTCCACAATATATATTAGAGTCTGAGATTGAAGCTGCACAAGGTGCTGTCTGTAGCATAATTTGTACTCAGCCTAGAAGAATATCTGCTATGTCTGTATCTGAAAGAGTTGCAGCAGAGCGTGGGGAAAAATTGGGACAATCTGTTGGTTACAAGGTTCGGCTGGAGGGTATAAAAGGAAGGGATACTCGTCTTCTCTTTTGCACTACAGGTGTATTGTTGAGGAGATTACTTGTCGACAGAAATCTAAAAGGTGTGACTCATGTTATTGTTGACGAAATTCATGAGCGTGGAATGAATGAAGATTTTCTCCTTGTTGTCCTAAAGGATCTTCTTCCACGCCGTCCAGACCTTAGGTTAATTTTGATGAGTGCAACCTTAAACGCTGAGCTTTTCTCTTCCTACTTTGGTGGGGCTCCAACTTTACATATACCTGGCTTTACATATCCAGTTCGAGCACATTTTCTTGAGGGTATTCTGGAAATGACTAGATATCGGTTGACACCTTATAATCAAATTGATGATTACGGTCAAGAGAAGACATGGAAAATACAAAAACAGGTTCAAACTTTGAGAAAAAGAAAGACCCAGATTGCTTCTGCTGTTGAGGATGCACTTGAAGCTGCTGATTTCAAGGAGTACAGCTTATGCACCCGGGAGTCATTATCCTGCTGGAGTCCCGATTCAGTTGGTTTTAACCTTATCGAACATGTTCTCTGCCACATTGTCAAGAATGAAAAGCCAGGTGCTATTTTGGTTTTTATGACTGGTTGGGATGACATAAATTCTTTAAAGGATCAGCTCCAAGCTCACCCTCTGTTGGGCGATCCAAGCAAAGTTTTGCTTCTTGCATGCCATGGCTCAATGGCCAGCTCTGAACAGCGGTTGATATTTGATAAGTCTGAAGGAGGAGTGAGGAAAATAATTCTTGCCACTAACATGGCTGAGACTAGTATTACCATCAATGATGTCGTCTTTGTGATTGATTGTGGGAAAGCGAAAGAGACATCTTATGATGCACTAAATAACACTCCTTGTTTACTTCCATCTTGGATCTCAAAGGCTGCTGCTCGGCAGAGAAGAGGAAGGGCAGGACGTGTTCAACCAGGCGAATGTTACCATCTTTATCCTAGATGTGTTTATGATACTTTTGCTGATTATCAATTGCCGGAGCTTCTAAGAACACCTTTACAATCCCTATGTCTTCAAATCAAAAGTCTAAACCTTGGGAGCATTTCAGAATTCCTATCCAGAGCTCTGCAACCACCAGAGCCTCTATCGGTTCAAAATGCTGTTGAATATTTGAAGATTATTGGGGCCTTGGATGACAATGAAAATTTGACAGTCTTAGGTCGTAACTTGTCAATGCTCCCTGTAGAGCCTAAACTTGGAAAGATGCTTATCTTAGGAGCTATCTTCAACTGTTTAGATCCTATAATGACTGTTGCTGCGGGTCTTAGTGTTAGAGATCCATTTTTGATACCATCTGACAAGAAGGATCTTGCAGAGTCTGCCAAGGCCCAGTTTGCTGCTGGTGCCTATAGTGATCATGTTGCACTTGTTCGGGCTTATGAGGGTTGGAGCAATGCAGAAGCACAGAAAGCGGGTTATGAGTACTGTTGGAGAAATTTCCTCTCTTCACAAACATTTAGAGCCATTGACTCTCTTCGAAAGCAATTTTTTTACTTGCTCAAAGATATAGGGTTGGTTGATTATAATACTGACAATTGCAATGCATGGAGTCATGATGAGCATCTGGTCCGAGCAGTCATTTCAGCTGGTTTATTTCCTGGAGTATGCTCTGTTGTGAACAAAGAAAAGTCAATAGCATTGAAAACAATGGAGGATGGTCAAGTTCTTCTGTATGCTAACTCTGTAAATGCCAGTGTACCCAAAATTCGATTCCCGTGGCTGGTATTCAATGAAAAGGTGAAGGTGAATTCAGTATTCCTCCGGGATTCAACTGGTATATCTGATTCAATGCTTCTCTTATTTGGTGGGAATGTTTCCAGAGGTGGACTGGACGGTCACCTGAAAATGCTGGGGGGATATTTGGAATTTTTCATGAATCCTGCCTTAGCTGAGACTTACTTAAGCCTGAAGAAGGAGCTGGAGGAATTAATACATAGAAAACTTCTGGATCCCAAGTTGGATATACAATCATCTGTTGAGCTTCTTTCAGCTGTGAGATTGCTAGTATCGGAGGACCAGTGTGCTGGGAAATTTGTCTTTGGTCGTCAAATGTTGTCACCATCAAATAAGACAAAAGACTCCAAATATAATTCCATTGAGAGTAGCAATTATAAAAACCAGCTGCAAACATTGCTTGCCAGGGCTAGACATGAACCGCCAACTTACAAAACAAGACAACTTAAAAACAACCAGTTCCGCTCTACTGTCATATTCAATGGCTTGAATTTTGTTGGCCAGCCTTGCAACAGCAAGAAGCAGGCAGAACAGGATGCTGCTTCTGAGGCTGTTCTGTGGTTAATGGGGGATAAACATTCTTCTAGTGATGACATTGGCGAGCTGCAATCATTGCTTGGCAGGGCTCGACATAACCCATCGAATAAGGCATCAAAGGAGGGAGAAGACTCCAAAAGTAGTTCTGTTGAGAGCGGTGATCGTAAAGGCCAGATGCAAACATTGCTTGTCCGGGGTGGAAAAGGCCAGCTGGAAAACTCTAGAAGTAGTTCTGTTGGGAGTGGTGATTGTAAAGGCCAGGTACAAACATTGCTTGCCAGGGCTGGACATGAACCACCAACTTACAAAACAAAACAAGTGGGAAGCTACCAATTCCGTTCTACCGTCACATTCAATGGCTTGAATTTTGCTGGCCACCCTTGCAACAGCAGGAAACAAGCAGAAAGCGTTGCTGCTGCTGAGGCTCTTCTATGGTTAAAGGGTGATACCCGTCCACAAGATGATTATGATGATGATGTTGTTGACGATATGTCTTTCCCTTTCAAAAAGAGCAACAAAAGAAGCAAAATTTCACTGAATGGTGGTAGAAGAAGATGA 4038 0.4324 MRYSASFQGFIIRTTTSASTTMSLRGPLFLLPHRARRLSLLSISLRHPSLGLRNFHAHSKIRSHIGDMGLVAPSRTTEVDWKERHVVGFRRRNIALLFWHQQSSSYGRFAYQDVSSDDSDLESGAPQQQRGGSSLDNIDEWRWKLTMLLRSKDEREVISRDKKDRRDFEHLSALASRMGLYSRLYSKVVVFSKEPLPNYRSDLDDKRPQREVVIPFRVHGEVNSLLNAHLSKKSRSFGGIVDTSFHRSSSAGIPADEGILEEPEPLAQNNVVREKILRRRSLQLRYQQEEWQESPEGQKMLEFRRSLPAFKAKDALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAAQGAVCSIICTQPRRISAMSVSERVAAERGEKLGQSVGYKVRLEGIKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLVVLKDLLPRRPDLRLILMSATLNAELFSSYFGGAPTLHIPGFTYPVRAHFLEGILEMTRYRLTPYNQIDDYGQEKTWKIQKQVQTLRKRKTQIASAVEDALEAADFKEYSLCTRESLSCWSPDSVGFNLIEHVLCHIVKNEKPGAILVFMTGWDDINSLKDQLQAHPLLGDPSKVLLLACHGSMASSEQRLIFDKSEGGVRKIILATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDTFADYQLPELLRTPLQSLCLQIKSLNLGSISEFLSRALQPPEPLSVQNAVEYLKIIGALDDNENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPIMTVAAGLSVRDPFLIPSDKKDLAESAKAQFAAGAYSDHVALVRAYEGWSNAEAQKAGYEYCWRNFLSSQTFRAIDSLRKQFFYLLKDIGLVDYNTDNCNAWSHDEHLVRAVISAGLFPGVCSVVNKEKSIALKTMEDGQVLLYANSVNASVPKIRFPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNVSRGGLDGHLKMLGGYLEFFMNPALAETYLSLKKELEELIHRKLLDPKLDIQSSVELLSAVRLLVSEDQCAGKFVFGRQMLSPSNKTKDSKYNSIESSNYKNQLQTLLARARHEPPTYKTRQLKNNQFRSTVIFNGLNFVGQPCNSKKQAEQDAASEAVLWLMGDKHSSSDDIGELQSLLGRARHNPSNKASKEGEDSKSSSVESGDRKGQMQTLLVRGGKGQLENSRSSSVGSGDCKGQVQTLLARAGHEPPTYKTKQVGSYQFRSTVTFNGLNFAGHPCNSRKQAESVAAAEALLWLKGDTRPQDDYDDDVVDDMSFPFKKSNKRSKISLNGGRRR 1345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01461 1345 Pfam DEAD/DEAH box helicase 315 468 IPR011545 GO:0003676|GO:0005524
Accr2g01461 1345 MobiDBLite consensus disorder prediction 1230 1245 - -
Accr2g01461 1345 Pfam Double-stranded RNA binding motif 1245 1306 IPR014720 -
Accr2g01461 1345 Pfam Double-stranded RNA binding motif 1107 1168 IPR014720 -
Accr2g01461 1345 PANTHER ATP-DEPENDENT RNA HELICASE 261 1050 - -
Accr2g01461 1345 Gene3D - 567 725 IPR027417 -
Accr2g01461 1345 FunFam Putative ATP-dependent RNA helicase DHX36 749 853 - -
Accr2g01461 1345 FunFam DExH-box ATP-dependent RNA helicase DExH3 569 725 - -
Accr2g01461 1345 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1106 1171 IPR014720 -
Accr2g01461 1345 Pfam Helicase conserved C-terminal domain 575 706 IPR001650 -
Accr2g01461 1345 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 573 747 IPR001650 -
Accr2g01461 1345 SMART DRBM_3 1107 1170 IPR014720 -
Accr2g01461 1345 SMART DRBM_3 1244 1307 IPR014720 -
Accr2g01461 1345 CDD SF2_C_RHA 564 715 - -
Accr2g01461 1345 FunFam DExH-box ATP-dependent RNA helicase DExH3 261 485 - -
Accr2g01461 1345 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 926 1008 IPR011709 -
Accr2g01461 1345 Gene3D - 264 485 IPR027417 -
Accr2g01461 1345 CDD DEXHc_RHA-like 323 483 - -
Accr2g01461 1345 MobiDBLite consensus disorder prediction 1192 1245 - -
Accr2g01461 1345 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 317 484 IPR014001 -
Accr2g01461 1345 Gene3D - 749 851 - -
Accr2g01461 1345 Gene3D - 1229 1311 - -
Accr2g01461 1345 Gene3D - 1086 1174 - -
Accr2g01461 1345 SMART ha2_5 769 860 IPR007502 GO:0004386
Accr2g01461 1345 MobiDBLite consensus disorder prediction 1194 1211 - -
Accr2g01461 1345 Pfam Helicase associated domain (HA2) 770 843 IPR007502 GO:0004386
Accr2g01461 1345 SUPERFAMILY dsRNA-binding domain-like 1243 1330 - -
Accr2g01461 1345 SMART ultradead3 305 493 IPR014001 -
Accr2g01461 1345 SUPERFAMILY dsRNA-binding domain-like 1105 1177 - -
Accr2g01461 1345 SMART helicmild6 601 707 IPR001650 -
Accr2g01461 1345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 868 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01461 Accr-Chr2 45549897 45567570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01461 K14442 - qsa:O6P43_008523 1819.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01461 2 45549897 45567570 Accr2g01461 2 45549897 45567570 ECH