LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g00284	ATGATGAACCTGGGAGAAAAACTCTTTACTCTGGAAGGAGAACAAGTTCAGATGAATGGTTCTTGGGTACCTGTCACCCCTGAGAAGCCAGTTCAAATAAGATCAGATATAATATCAGCTGGCTGGCAGGAAAACCGAATGGTGGGAGGGAATTTGAATAGTGGCTACATGAAACAGATGCTGCAGTGTAGTGGGCTAGATCACAATGTCCATCTAGTTGGACAAACTGAGGCGTACAATTATTTTGGTGGCCGTTCTTCAGAGAGAGCTGGTGTAATCAATCACCATGATGTGGGCTTTGACAGCAATAGATTGAATACTTTGGAACTTCTATTCATGAACAATGAAAGTAACAATGGTTATGCTGACAGGAACTTGAGTGAAAGTATAAGCATGGCAGTAAGAACACCAGTGCTACCAAAATTTCATCCTCACACAAGAAGTAATGGGAGAGATTTCAATGTAGATGGTTTCGCTGTCAACGAAAACAATAACTATGCAGATTCAGATTCCGTGTGCACAGACACAAATCTTTCTGTCCCAAATTTGAATTCTGAATGTGACAGCAGCAACTTATATGATTTTCTGAACAATGACATTAACTGTTCATTCTCAAGCCTGTTGAATAGTAGCCTATCTGAGTCGGAGATACCCAATGGTGGTTATTACACACCTTGCAGACCCAACTATGATCAAAACTCTGCAGATGTCACAGAAGTTGATGATGTCTTTAGTTTCACCAACTCCTTGCAGTCAGCACCTGGATCAATCGATCAGCTCAATAAATTTACAGACAACCACTTTATGAAGTATGCAACAGCTGAAACTCAAATTCAGGTGACAGACAACTTGGTTGCATCCACAGAAAATGATCACAACGAATATTGCAATGAACTTCTACAACATATTGTTGATACATCTGCAGCAATTTCTAAATCGCACAACGGTTCTGAAAATGATTATCGTAGTGGAAATGGCTTGGATATTGATCTGAACAAGACACCTGAGCAGAAGCCACCTAGACGAAGAAAACATAGGCCAAAGGTAATTGTAGAAGGCAAGCCTAAAAGAACTCCAAATGCTGAAACTAGAAAGAAGAGAGTATCCAAGGAGAATCCACCCCAAAAAAGGAAGTATGTACGAAAGAAAGTCCTGAAAGAAGGAGCAACACCGCAAGCTGATGTTGTAGAAACTTTAGGTTCTGCAACTGCAACAAGAAAATCTTGCAGGAAAGTTCTAAATTTTGATTTAGAAGAGAGTAGATATAAAGACCAGAACAAAACTGTCAATCAACAGGAAATACGGGGCAGAAATGGGTTGTTCACAGAGTTGATCAATGCAGCAAGCATATGTTATGATACAAATTCAGCTTTGCATTTCAGCAAGCAAGATGTATTTACAATTGAAAACCAGCAACCCAGAACCAGAGATGATGGTGCCTTTTTATTTCACCAAAAGCTAAGTGACAGATACCTGCCGAAAGAGCAAGCAAATGTACCCTTGTCGGCAAATACAGAAATTCTGGTTAAAAATTTGTCAGAGACTGAGAAAGGTCCAGCTCAAGGCAATGCTGGGTTATGCAAGGAAAGAAACAAAGGATGCTTGGAGCAACGTATTCATGCAGATGGATCTAAAAATGTTCCCTTGCAATCAGTGACATGTCTAGAGTTCCCTCAAAGGACCCAAGTACCAATGTCCCAAAATATCCTTCATTTGTTGCCGAACTTTTTGTCCAATTGCATTGAAGGAAGCAGTTTGAAGAGAAAATATTACCATGCCGATGAGAAGCAATATGTCTCTGCCACAAATCCACTTAATTCTTCCTTATTGCATCAAGAGATTTTCCAGGTGGATGAAAATTATAATGGCACACCTATGGATAAACATGTATTGAATACTCAGAAAAGGAGGAAAACTCAAAATCAACTTGCTTCACAAAAAGTAAGAAGAAAAGGCAAAAATAAATCTCAAACCCATTTGACTGATGATACACCAGGCTGCTATTCTGGTGATTTCCTAACTAGCTCAGATGCACTCCAGAAGATATATCCCACACCAATTGACGAGATCATTTGTCGATTCAAAGATCTCAACCTTGGGGATAGCAATATATCAAGAATGGATGAACAAAGTGCGATTGTCCTATATAAGGGAGAAAATTCAATTGTTCCATATGAGGGGTTTGACTTCACAAAAAAACGCAAACCAAGGCCCAAAGTGGATCTTGACCCAGAAACAGAGAGAACCTGGAAACTATTGATGGATAAGGATGGAAGTGAAGGCCTTGAGGGAAATGACAAGGAAAAGGAGAAGTGGTGGGAAGAGGAAAGAGAAGTTTTTCGTGGAAGAGTTGATTCCTTCATCGCACGAATGCATCTTGTCCAAGGAGATAGACGCTTTTCACGGTGGAAGGGATCAGTAGTGGATTCAGTGATAGGAGTCTTCCTTACTCAGAATGTTTCAGATCATCTTTCAAGCTCAGCCTTCATGTCTCTAGCAGCAAGGTTTCCTCTCAAGTTAGAAAGTGACGATAGATCTTGCTGTATTGTTGGTACAGAAAAATTGGTTGAAAAACCAGAAATCTTCATGATAAATCGAGATGACATCATGATATCATCCGATAAAAGATTAAGTCACCCAACCTACCATCAAGGCTTTGTGCCTCCCCATGATACAAGTGAGCACTGGAGAGACTGCGAGACCTCAAGAATAAAAACAAGTCTAGGAGGTCCATATAATCAGAACTCAAAGGATGAAATCATATTGTCACAAGATTCTCTTGACCATTCAATTTCTGAAGCCATTGGAGGGATAAGATCCTGCTCAGGTTCCAATTCAGATGCAGAAGGCCCCACAACTGGGTGTGAACCCTGGAAGACTCGACTTTTAAATTCAACAAATTCTGCACAGGTAGGAAAGATGACACAGTTCCAAGAATTTTGCAGTAGTATAAATGGAGCGTCACTGTTTGATGAGGGAACCAAAGATGGACAGGTTCTACATGCAAAATATGCCAATCAAAACTCAAGATCAGGTGAAATTGATGATCTCATTTCGCACTCAGCATCTAATCATCTGATCAATTTTGGAAATCCACAAAAGCAAGTGCCTGAAGTTTATTCAAAAGACTATGAGTTACGTGACTTAGAGGCACGTGAGATGTTGAAAACTTCTCAAAAGAATGGTAAGGAGCCTTCTGGGCCAGCAACTATTTCCCTCATCAAGAAGTTACAAGATACTGACCATAGGAGAGTCAGCATCCAGGATGTAGGAGGAAGTGTGGATAAATTGACTGAGAAGCAATATGGGCCAATTGAGTCTCAAGAGTTACCAATAATTAACCCATATGAACCATTAAGTGTGCATGTTGTTCAACTGCAAGATAACTCTTCATCAGGATCTGATACAAATCATCATCAATCTTTATCTGGCCATCATCCTGCAGGTGAGGAAAATTTAAAATTCAATGGCATGCCATTTATAGAATCAGTAAGTACTACTCAGAAATTGAGTACAGGGCAGTATGATTCAGTGAAGAATTCTCCCAACATCTGTAATTCCGTGGAAGGTTTTCATGCTGAAAAAAGAATATCTGAGGTAAATGGACAAGCCTACTCGAATGATAGAGCTGCTGAGCCGAAGCTGCAGGAACAACTTAGCTCTTCTGGCACCACAAATATAAAGAGCAAGCAGAAAGCTTCAAGACCCAGGAAAATAAAGCTAGAGACCGAGAAGGTGAAGAAAGTTAATTGGGATGATTTAAGAAAGAAAGCACATGCCAATGGGACAAAAAGGGAAAGGAGCAAGGAAACAATGGATTCACTGGACTACAAAGCAATGAGACGTGCCTCAGTCAAAGAAATATCTGAAACTATTAAAGAAAGAGGAATGAACAATATGCTAGCAGAACGAATGAAGGAATTTTTGGACAGACTGGTTAGGGAACATGGAAGCATTGATTTGGAGTGGTTAAGAGATGTTCCTCCTGATAAAACAAAAGATTATTTGCTAAGCATACGTGGATTGGGGCTGAAGAGTGTGGAGTGTGTACGGCTTCTAACGCTTCATCATCTTGCTTTCCCAGTTGACACAAATGTTGGGAGGATAGCAGTTAGACTTGGATGGGTCCCTCTTCAACCACTTCCTGAATCACTTCAACTACACCTCCTTGAATTGTATCCAGTGTTGGAATCAATTCAGAAGTATCTCTGGCCCAGATTGTGCAAACTTGATCAGAGAACCCTGTATGAGCTGCACTACCAGATGATTACCTTTGGAAAGGTTTTCTGTACAAAGAGTAAACCAAATTGCAATGCATGTCCTATGCGTGCAGAGTGCAGACACTTTGCAAGTGCTTTTGCAAGTGCCCGGCTTGCATTGCCTGGACCAGAAGAGAAAGGAATGGTGTGTAATCCAGTTCCCATTGCATCTGAGAGAAATCCTACTCTAAATATGAATCCAGTGGTACTACCTCTCCCTGACAACAATTTGCTTAGAGAAGCAACTTCTGTAATCCGTGGGTGTGAGCCAATCATTGAAGAACCGGTATCACCAGAACGAGAGTGCACAGACACATTGGCATTGGAAAGTGACATTGAGGACTGGTACTGTGAGGATCCTGATGAAATTCCAACTATCAAGCTCAATGCTGAAGAGTTTGCAATCAATATACAAAACATATTGCAAGGAAACATGGAGCTTGCGGAAGGTGACTTATCTAAGGCACTCGTTGCTTTAAATCCAGCTACAGCTTCTATTCCTACACCAAAACTGAAGAATGTTAGTCGGCTACGGACAGAACACCTAGTATATGAGCTTCCAGATTCTCATCCTCTCTTGGAAAAGATGGATGAGCGTGAACCTGATGACCCAAGCCCATATCTTCTTGCAATTTGGACGCCAGGTGAAACTGCAAATTCGATCGAGCAACCGGAGAAAAGATGCAAATCCCAAGACTCAAACAACCTATGCTATGACCAGACATGCTTTTCATGCAATAGCGTTAGGGAAGCTAATTCGCAAACAGTCAGAGGAACTCTCCTGATACCTTGTAGAACAGCAACAAGGGGGAGCTTTCCACTAAATGGTACTTACTTTCAAGTTAACGAGGTATTTGCAGACCATGCATCCAGCATTGAACCCATTGATGTCCCTAGGGAATGGATATGGAATTTGCCAAGGAGGACTGTGTACTTTGGAACATCTGCTTCAAGCATTTTCAGAGGTCTCTCAACTCAAGCGATTCAACAATGCTTTTGGAGAGGGTTTGTTTGCGTCAGAGGGTTTGACCAAAAACGGCGCGCGCCTTGCCCTCTAAGAGCCAGATTGCATTTTCCAGTTAGTAGATTAAATAGAGGGGAGAAACTGAAAGCAAAAGAGAATAATAGGACATGA	5394	0.4105	MMNLGEKLFTLEGEQVQMNGSWVPVTPEKPVQIRSDIISAGWQENRMVGGNLNSGYMKQMLQCSGLDHNVHLVGQTEAYNYFGGRSSERAGVINHHDVGFDSNRLNTLELLFMNNESNNGYADRNLSESISMAVRTPVLPKFHPHTRSNGRDFNVDGFAVNENNNYADSDSVCTDTNLSVPNLNSECDSSNLYDFLNNDINCSFSSLLNSSLSESEIPNGGYYTPCRPNYDQNSADVTEVDDVFSFTNSLQSAPGSIDQLNKFTDNHFMKYATAETQIQVTDNLVASTENDHNEYCNELLQHIVDTSAAISKSHNGSENDYRSGNGLDIDLNKTPEQKPPRRRKHRPKVIVEGKPKRTPNAETRKKRVSKENPPQKRKYVRKKVLKEGATPQADVVETLGSATATRKSCRKVLNFDLEESRYKDQNKTVNQQEIRGRNGLFTELINAASICYDTNSALHFSKQDVFTIENQQPRTRDDGAFLFHQKLSDRYLPKEQANVPLSANTEILVKNLSETEKGPAQGNAGLCKERNKGCLEQRIHADGSKNVPLQSVTCLEFPQRTQVPMSQNILHLLPNFLSNCIEGSSLKRKYYHADEKQYVSATNPLNSSLLHQEIFQVDENYNGTPMDKHVLNTQKRRKTQNQLASQKVRRKGKNKSQTHLTDDTPGCYSGDFLTSSDALQKIYPTPIDEIICRFKDLNLGDSNISRMDEQSAIVLYKGENSIVPYEGFDFTKKRKPRPKVDLDPETERTWKLLMDKDGSEGLEGNDKEKEKWWEEEREVFRGRVDSFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLKLESDDRSCCIVGTEKLVEKPEIFMINRDDIMISSDKRLSHPTYHQGFVPPHDTSEHWRDCETSRIKTSLGGPYNQNSKDEIILSQDSLDHSISEAIGGIRSCSGSNSDAEGPTTGCEPWKTRLLNSTNSAQVGKMTQFQEFCSSINGASLFDEGTKDGQVLHAKYANQNSRSGEIDDLISHSASNHLINFGNPQKQVPEVYSKDYELRDLEAREMLKTSQKNGKEPSGPATISLIKKLQDTDHRRVSIQDVGGSVDKLTEKQYGPIESQELPIINPYEPLSVHVVQLQDNSSSGSDTNHHQSLSGHHPAGEENLKFNGMPFIESVSTTQKLSTGQYDSVKNSPNICNSVEGFHAEKRISEVNGQAYSNDRAAEPKLQEQLSSSGTTNIKSKQKASRPRKIKLETEKVKKVNWDDLRKKAHANGTKRERSKETMDSLDYKAMRRASVKEISETIKERGMNNMLAERMKEFLDRLVREHGSIDLEWLRDVPPDKTKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEEKGMVCNPVPIASERNPTLNMNPVVLPLPDNNLLREATSVIRGCEPIIEEPVSPERECTDTLALESDIEDWYCEDPDEIPTIKLNAEEFAINIQNILQGNMELAEGDLSKALVALNPATASIPTPKLKNVSRLRTEHLVYELPDSHPLLEKMDEREPDDPSPYLLAIWTPGETANSIEQPEKRCKSQDSNNLCYDQTCFSCNSVREANSQTVRGTLLIPCRTATRGSFPLNGTYFQVNEVFADHASSIEPIDVPREWIWNLPRRTVYFGTSASSIFRGLSTQAIQQCFWRGFVCVRGFDQKRRAPCPLRARLHFPVSRLNRGEKLKAKENNRT	1797

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g00284	1797	SMART	endo3end	1258	1428	IPR003265	GO:0006284
	Accr2g00284	1797	PANTHER	TRANSCRIPTIONAL ACTIVATOR DEMETER	282	1788	IPR044811	GO:0019104\|GO:0035514\|GO:0080111
	Accr2g00284	1797	SUPERFAMILY	DNA-glycosylase	782	1451	IPR011257	GO:0003824\|GO:0006281
	Accr2g00284	1797	CDD	ENDO3c	1278	1394	IPR003265	GO:0006284
	Accr2g00284	1797	FunFam	DNA glycosylase/AP lyase ROS1	1350	1458	-	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	1212	1238	-	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	1213	1230	-	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	311	378	-	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	635	664	-	-
	Accr2g00284	1797	Gene3D	-	1345	1458	IPR023170	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	352	375	-	-
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	1128	1143	-	-
	Accr2g00284	1797	Pfam	Permuted single zf-CXXC unit	1644	1675	IPR028924	-
	Accr2g00284	1797	SMART	ccc3	1429	1449	IPR003651	GO:0051539
	Accr2g00284	1797	MobiDBLite	consensus disorder prediction	1128	1153	-	-
	Accr2g00284	1797	Pfam	RRM in Demeter	1678	1778	IPR028925	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g00284	Accr-Chr2	7066466	7077147	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g00284	-		-	pcin:129312503	2728.74

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr2g00284	2	7066466	7077147	Accr2g00284	2	7066466	7077147	ECH