Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03486 ATGAGAACAAGCAACCACTTGATTGGTTTACTAAACTTCATAACGTTTTTGCTGTCCATTCCCATACTGGGCGGAGGGATATGGCTGAGCAGCAGAGCAAACAACACAGACTGCCTCACCTTCCTCCAGTGGCCTCTCATCGTCATTGGAATCAGCATCATGGTCGTCTCTCTGGCCGGTTTCGCTGGCGCCTGTTACCGCAACACCGTCCTCATGCGCCTCTACCTGCTGGTGATGTTCCTGGTCATCGCAGTTCTCATCGGATTCATCATCTTCGCCTATGCCGCGACGGATAAAGGTTCCGGTCGGACCGTGATGAACCGGGCCTATTTAGACTACTATCTGCAGGATTACTCGGGCTGGTTGGAGGAGCGGGTGGCCAGTGATACCTACTGGGGAAAGATTAGCTCATGCGTGAGGGACTCTAAGGTGTGCAGAAGGATGGACAGAACTGTTGGTGGCATGCCTGAAACTGCTGAAATGTTCAATCTCAGAAGGCTCACTCCTATCCAGTCTGGTTGCTGCAAGCCTCCAACAGAGTGTGGGTACGTGTACGAGAGGGAGACTGTGTGGAACCCAGGGATGGGGGTGGGAACCAATAACCCAGATTGCAGCAGGTGGAGCAACGATCAGAGTCAGCTGTGTTATGACTGTGACTCGTGCAAAGCTGGGGTTCTGGCCAGCCTCAAGAGGAGCTGGAGGAAGGTTTCTGTCATCAACATCGTTGTCATGATTATTCTTGTCATCGCTTATATCATTGCTTATGCTGCTTTCAGAAACAACCGCAAGATCGACAACGACGAACCCTCCGGCGAAGCTCGCATGACCAAAGTTGAACCTTCCAGGATTCATTTTTAG 858 0.5152 MRTSNHLIGLLNFITFLLSIPILGGGIWLSSRANNTDCLTFLQWPLIVIGISIMVVSLAGFAGACYRNTVLMRLYLLVMFLVIAVLIGFIIFAYAATDKGSGRTVMNRAYLDYYLQDYSGWLEERVASDTYWGKISSCVRDSKVCRRMDRTVGGMPETAEMFNLRRLTPIQSGCCKPPTECGYVYERETVWNPGMGVGTNNPDCSRWSNDQSQLCYDCDSCKAGVLASLKRSWRKVSVINIVVMIILVIAYIIAYAAFRNNRKIDNDEPSGEARMTKVEPSRIHF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03486 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016020
Accr1g03486 285 MobiDBLite consensus disorder prediction 266 285 - -
Accr1g03486 285 PRINTS Transmembrane four family signature 66 94 - -
Accr1g03486 285 PRINTS Transmembrane four family signature 6 29 - -
Accr1g03486 285 PRINTS Transmembrane four family signature 39 65 - -
Accr1g03486 285 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03486 Accr-Chr1 71346921 71349323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03486 1 278 Miscellaneous Gene Families AT5G60220 69.784 1.21e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03486 - - gmx:100798336 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03486 1 71346921 71349323 Accr13g00253 13 2444771 2448143 CCT
Accr1g03486 1 71346921 71349323 Accr1g03486 1 71346921 71349323 ECH