Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03069 ATGTGGAGAGATAGTGGCACTCCTGCTGATTCTTTCTACCAAGTCCGTCCTGAGTATGCCGACGATGTCCCCAAAAGTCGATTTAAGATCAAGACTGGCAAAACTCTAAGTTCAAGGAAATGGCATTCTGCATTTGATGCTGAAGGGCGTCTGGATATAGGCAAGACTCTGAGTCGAATCTACCGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGCTGCTATGATCCAAAGAGTACATTTGATGAAAGAGAGCAGATAAGACAGCGACGGAGGATGCAATATGCTAAATGGAAGGAAGATTGCCGCCAGTTGTTTCCACTTGTCGGAAGTGGTAAATTTATTACAGCACCTATAATCACAGAAGATGGCCAGCCAATTCAAGATCCACTGGTGTTGTTGGAAACAAATGCAGACAAGGGAGTAACTGTCCCTGCTCAAAATGGCATAAATGATTCAAGTACAGGCAGTGCGCATAACTTAGAAAAGGTGATGGACAAGAGAGTAATCCAATGGATGTTAACTCTTCATCAAATAGGTCTTGACGTGGTTCGCACTGATAGAACACTGGTTTTTTATGAGAAGCAAGAGAACTTGTCAAAACTATGGGATATTCTTGCGGTTTATGCGTGGATAGATATAGATGTGGGTTATTGTCAAGGAATGAGCGACCTTTGCTCCCCTATGGTGATTCTTCTCAATGATGAAGCTGATGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACCAATAACTCAGTTGGGGTGGAGGCTCAACTTAGTAACTTGGCTTTGGTTACTCAGGTCATTGATCCAAAACTTCATCAACATATAGAGGCTCTTGGGGGAGGTGACTACCTGTTTGCTTTTCGGATGCTTATGGTCTTGTTTCGTCGAGAATTCTCCTTTTGTGATTCCTTGTACCTTTGGGAGATGATGTGGGCTTTGGAATACGATCCTGACTTGTTCTTGATATATGAAGAGTCTGAATCAGTTTCTAAAAAAGCTGAGAGATCTACTAAAGGAAGAACAAAGTCATTACGTCAATGTGGGAAGTTTGAGAGAGAAAATATGAAAAATGCTGCAAAGACTGCTGATGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATGAGAGCTCAAAACTAAAGCATGAAGCACGTGGCCTGGATGATGTTGTCAAGATATTGAATGACATGACCGGAAAATTAGATGCCAAAAAAGCTTGCACTGGAGCGATGAAACTTCACAGAAAATATTTGAAAAAGGCTCATGCTAACAAGTCATAA 1341 0.4206 MWRDSGTPADSFYQVRPEYADDVPKSRFKIKTGKTLSSRKWHSAFDAEGRLDIGKTLSRIYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQRRRMQYAKWKEDCRQLFPLVGSGKFITAPIITEDGQPIQDPLVLLETNADKGVTVPAQNGINDSSTGSAHNLEKVMDKRVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDIDVGYCQGMSDLCSPMVILLNDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLALVTQVIDPKLHQHIEALGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLIYEESESVSKKAERSTKGRTKSLRQCGKFERENMKNAAKTADAPLPISVFLVASVLKDESSKLKHEARGLDDVVKILNDMTGKLDAKKACTGAMKLHRKYLKKAHANKS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03069 446 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
Accr1g03069 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 47 290 IPR035969 -
Accr1g03069 446 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 159 260 - -
Accr1g03069 446 Pfam Rab-GTPase-TBC domain 171 328 IPR000195 -
Accr1g03069 446 SMART tbc_4 61 353 IPR000195 -
Accr1g03069 446 Gene3D - 266 445 - -
Accr1g03069 446 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 34 415 - -
Accr1g03069 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 437 IPR035969 -
Accr1g03069 446 FunFam TBC1 domain family member 15-like 162 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03069 Accr-Chr1 67579761 67585669 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03069 - - csav:115697426 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03069 1 67579761 67585669 Accr1g03069 1 67579761 67585669 ECH