Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03060 ATGCGCGCCTCCAAAGCTAAAAGCCTTAGCACTCTGAAGACTCTCATACGTTCAGCGGGAAGCACTATCGCATTCAAATATTCTCTTCGAACCAAACCCTTTTCTGAAAACTGCAATTCTAGACTCTACAGTGATTATCCGCTCTCAGGCCTCAAGCTTAAGCAAGCCCCTGAGTCAGAGGATCTGCCCGGTATGGTGCATATGGAAATCCGTTCAATATTGGACTCCTGTCAGTTGGACAATAAACATGAACCCAGGGATGTTGACAATGCAAAAGATTTGGTAGAAATATCAGATATGTCACGCTTGATGAGGAATATACCTCATAGTACAGTATCTCTGAAACGGAAAGAGTTTTCTCGGGAAAAGAAACGAAATTGCATGTTTGAATCCAGACAATCAAACCGTTTTCACAAGTTGCTTGTACGTAGTGCTGATAAACTAGGGGCAGACGTTGTGCATAACTTGTTCTGTAAGTTGGGACGAAAACCAGGTGTGAAAGATTACAATGCATTGATAGGAATATGCATAGATAAGGTTAGAGAAACTGAAGATAAAGAAATTGCTATTGAAGAAATGGCCAAGTTGTTTCACATCGTAAAATCAATGAGGGAACAAGGTTTTCAGTTTGAAGAGAAAACTTATCGCCCACTTCTTTTGCATGTGATAGAGATGGGTATGGTAGAAGAGTTTCAGTTTTTTATCAACATTATCGAAGACAATAATCCCAGCTCACTTTCAAGATTGGGTTACTATGAAATGATGCTCTGGTTAAGAGTTAATAATGAAGAAAAGATTCGAGATGTTTGTGCCTTTATTGCAAACAATGATGGTGCAGACACTTCAGAATTACGAGAAAATTATCTATTGGCTCTCTGTGAAAGTGATCGGAAGAAGGATATTTTGCAGGTGCTGGAAATTGTAGACATGAAAAAGATTTCATCTGCCGAATCTAAAGCAAAGATATTTCAATCATTAGGAAGGCTACTATTGGAACCTATTGCAGAGAAGTTCCTTTGGGATTTCAAAATAAGTGATCATGAACCAGATAATATCACAAACTTCATTGCTAGCTATGTTGTTAGCATGCCAAATTTAGCGATGGAGGATGTCGTCTCAAAATTCAAGGAATTGCACCAGATGCTGAAAGTTCGACCTTCATCCTCATCATATGAGAAGCTCATTTTGCACAGCTGCAACTTATTGAAGGTGCCTATAGCTCTTGATATTGTTGATGAAATGTGTGAAGGAGGCTTTACCTTATCAGCTGCGGTGTTGCAATCCATATTACAAACTTGTGCGGAAACCCATGAATATATTCTGGCCCATCGGATCTACTGCACCATTCGTCGGTACAATTTAAAGTTGAATGGTGAAATATTCAGGTGTCTAATAGTTTTGTTCACAAAGCTGAAAGATTTTGAAAGCGCATATAAGATGCTTGATGAGTTGGATGAAAGAGGTTTGAAGCCTACGACAGGCATGTATAATGCTATTATGGGAGAACATTTTCAAGAGAAGAACATTTGTGATGGGCTGAGAGCCCTTGAGCACATGCAGTGTGCCAATGTAAGACCTGATTTACAGACTTTGAGCTATCTGATCAGCAACTCTGAAACTAAAGAGGATATAAAGAAGTATTATGCAGAACTGAAGCGGTCTGGACTCCAACCCACCAAGCAAATTTTGACCACCCTTATAAGTGCGTATGCAGCATGTGGAGAGCAGAGTAGTCAATAG 1740 0.396 MRASKAKSLSTLKTLIRSAGSTIAFKYSLRTKPFSENCNSRLYSDYPLSGLKLKQAPESEDLPGMVHMEIRSILDSCQLDNKHEPRDVDNAKDLVEISDMSRLMRNIPHSTVSLKRKEFSREKKRNCMFESRQSNRFHKLLVRSADKLGADVVHNLFCKLGRKPGVKDYNALIGICIDKVRETEDKEIAIEEMAKLFHIVKSMREQGFQFEEKTYRPLLLHVIEMGMVEEFQFFINIIEDNNPSSLSRLGYYEMMLWLRVNNEEKIRDVCAFIANNDGADTSELRENYLLALCESDRKKDILQVLEIVDMKKISSAESKAKIFQSLGRLLLEPIAEKFLWDFKISDHEPDNITNFIASYVVSMPNLAMEDVVSKFKELHQMLKVRPSSSSYEKLILHSCNLLKVPIALDIVDEMCEGGFTLSAAVLQSILQTCAETHEYILAHRIYCTIRRYNLKLNGEIFRCLIVLFTKLKDFESAYKMLDELDERGLKPTTGMYNAIMGEHFQEKNICDGLRALEHMQCANVRPDLQTLSYLISNSETKEDIKKYYAELKRSGLQPTKQILTTLISAYAACGEQSSQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03060 579 NCBIfam pentatricopeptide repeat 460 492 IPR002885 -
Accr1g03060 579 Gene3D Tetratricopeptide repeat domain 365 543 IPR011990 GO:0005515
Accr1g03060 579 Pfam Pentacotripeptide-repeat region of PRORP 404 553 IPR033443 -
Accr1g03060 579 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Accr1g03060 579 PANTHER OS02G0132600 PROTEIN 10 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03060 Accr-Chr1 67474454 67480697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03060 372 578 Glycosyltransferase AT1G05670 20.370 1.07e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03060 - - gmx:100306302 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03060 1 67474454 67480697 Accr1g03060 1 67474454 67480697 ECH