Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03051 ATGGCTGCCATGGCTGCTCTTCAGAGCTCCTTCACCTCTCTCTCCCTTTCATCCAACAGTTTCATGGGGCAACGCCTCTCCCCCGTCACTCTCTGCCCCGTTCCAGGCAAGTCAGCAGAGAAGCGATGCCTCATCGTAATGAAGCTGAAAAGATGGGAGCGAAAGGAATGTAAAATTGGAGAGATTACTAAGATCTTCAAGCATAACAGCACCATCATCGTCAAAGACACAAATTTGAAGACAAAGCATATGAAGAGTAGAGAAGAGGGCGAGCCAGGGCAAATCATTAAGATCGAAGGTCCCATACACAGCTCAAATGTGATGCTATACTCTAAAGAACAGGAGGTGGCAAGTCGCGTGGGCCATAAGGTTCTTGAAAATGGCACGAGAGTCCGTTACCTAATAAAAACTGGAGAAATAATTGATAATGCAGAGAACTGGAAGAAATTGAAGGAGGCGAAGAAGAAAAATGAAGAAGCTGTCGCTGCTTCTTAA 495 0.4566 MAAMAALQSSFTSLSLSSNSFMGQRLSPVTLCPVPGKSAEKRCLIVMKLKRWERKECKIGEITKIFKHNSTIIVKDTNLKTKHMKSREEGEPGQIIKIEGPIHSSNVMLYSKEQEVASRVGHKVLENGTRVRYLIKTGEIIDNAENWKKLKEAKKKNEEAVAAS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03051 164 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 78 141 IPR003256 GO:0003735|GO:0005840|GO:0006412
Accr1g03051 164 SUPERFAMILY Translation proteins SH3-like domain 58 140 IPR008991 -
Accr1g03051 164 Gene3D - 44 140 IPR014722 -
Accr1g03051 164 NCBIfam 50S ribosomal protein L24 58 141 IPR003256 GO:0003735|GO:0005840|GO:0006412
Accr1g03051 164 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 58 162 IPR003256 GO:0003735|GO:0005840|GO:0006412
Accr1g03051 164 CDD KOW_RPL26 58 109 IPR041988 GO:0003723
Accr1g03051 164 Hamap 50S ribosomal protein L24 [rplX]. 34 136 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03051 Accr-Chr1 67385829 67388115 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03051 K02895 - qsa:O6P43_028971 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03051 1 67385829 67388115 Accr1g03051 1 67385829 67388115 ECH