Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03030 ATGCCTGAGGCTTACTTAGATTCCAACATCTCAGAGCTCAATAAGAAAGCTCTTCAGTTCATTGAGGATGTCACCTCCAAGGCCGATCAACTCCAGAACAAGGTCCTCTCTCAAATTCTCTCCCGCAACGCCCACGTTGAGTACTTGCAGCGACATGGCCTCAACTGCCGTACTGACCCCCACTCTTTCAAGAAACTCCTCCCCGTCGTCACCTACGACCACATCCAACCTGACGTCACCCGCATCGCCAATGGCGACACTTCCCCTATCCTCTGCTCCCATCCCATTTCCGAGTTTCTCACAAGCTCTGGGACGTCTGGAGGGGAGAGAAAGCTGATGCCAACAACTGAACAGGAAGGAGAAAGAAGGAGTTTGCTTTATAGCCTGTTGATGCCGGTGATGAGCCAGTTTGTGCCTGGCCTTGAAAAAGGCAAAGGAATGTACTTGTACTTCATTAAATCTGAGGCTAAAACGCCCGGAGGCCTCTTGGCTCGTCCCGTTCTCACTAGTTATTACAAAAGCTCTCGTTTTAAGAACTCATCACTTTCTGACCCCTACGCTAACTATACCAGTCCCATTGAGACCATACTTTGTCCTGATTCTTACCAAAGCATGTACTCCCAATTGCTCTGTGGTCTCTGCCAAAACGATGTCGTCTTTCAGGTTGGCGCTGTTTTCGCCTCTGGCTTCATTCGGGGAATTCGCTTCCTTGAGAAACACTGGGCCCTTCTTTGCAACGACATTAGAACAGGAACAATTAACCCCCAGATCACAGACAACTCTGTGCGAGATTCTGTCATGAATATCCTCAAACCCGACCCGAATCTCGCGGATTTTATAGAGTCTGAGTGTAGCAAAAACTGTTGGCAGGGGATCATCCCCAGGCTGTGGCCCAACACTAAGTATGTGGATGTTATTGTGACGGGGACGATGTCACAGTACATTCCCACACTGGATTATTACACCAATGGCCTCCCACTTGTTTGCTCCATGTACGCTTCCAGCGAGTGCTACTTCGGTCTCAATCTCAACCCTCTCTGTAAACCCAGTGACGTCTCTTACACCCTCATCCCCACCATGGCCTACTTCGAGTTCCTTCCTGTCAACCGAACCAACGGACTCACCGATTCTCACGATGAACAGCAACAGTTAGTGGACCTCGTCGATGTTAAGCTCGGCCAAGAATATGAGCTCGTCGTCACAACCTTCGCCGGGTTATATAGGTACAAAGTGGGAGACGTGCTTAGAGTGGCGGGATTCAAGAACAAGGCACCCCAGTTCAACTTCATATGCAGGAAGAACGTGGTGCTGAGCATTGATTCAGATAAAACAGATGAAGTTGAGCTTCAGTACGCAATGAAGAATGCTGTCACCCACTTGGCTCCGTTTGATGCTTTTGTGTCTGAGTACACCAGCTACGCAGATACAAAGACAATCCCAGGGCACTATGTGTTGTACTGGGAGCTGAACCTCAATGGGACAACTCCGATTCCTGCATCTGTGTACGAGGATTGCAGTCTGACCATTGAAGAATCGCTCAACAGTGTGTACCGTCAGGGACGTGTGTCGGACAAATCAATTGGGCCGCTTGAGATTAAGATTGTGGAACAGGGGACGTTTGATAAGCTCATGGACTATGCTATTAGCTTAGGAGCATCCATAAACCAGTACAAGACACCGAGGTGCGTCAAATTTGCACCTGTTGTGGAGCTGTTGAACTCGAGGGTAGTGGCCAGCTACTTTAGTCCCAAATGTCCCAAGTGGGTTCCGGGACACAAGCTATGGATCAATCAGAATTAA 1800 0.49 MPEAYLDSNISELNKKALQFIEDVTSKADQLQNKVLSQILSRNAHVEYLQRHGLNCRTDPHSFKKLLPVVTYDHIQPDVTRIANGDTSPILCSHPISEFLTSSGTSGGERKLMPTTEQEGERRSLLYSLLMPVMSQFVPGLEKGKGMYLYFIKSEAKTPGGLLARPVLTSYYKSSRFKNSSLSDPYANYTSPIETILCPDSYQSMYSQLLCGLCQNDVVFQVGAVFASGFIRGIRFLEKHWALLCNDIRTGTINPQITDNSVRDSVMNILKPDPNLADFIESECSKNCWQGIIPRLWPNTKYVDVIVTGTMSQYIPTLDYYTNGLPLVCSMYASSECYFGLNLNPLCKPSDVSYTLIPTMAYFEFLPVNRTNGLTDSHDEQQQLVDLVDVKLGQEYELVVTTFAGLYRYKVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQYAMKNAVTHLAPFDAFVSEYTSYADTKTIPGHYVLYWELNLNGTTPIPASVYEDCSLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVVASYFSPKCPKWVPGHKLWINQN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03030 599 Pfam GH3 auxin-responsive promoter 21 564 IPR004993 -
Accr1g03030 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 585 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03030 Accr-Chr1 67056646 67058650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03030 6 582 EF-hand Containing Proteins AT1G23160 50.000 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03030 K14487 - gmx:100791987 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03030 1 67056646 67058650 Accr1g03030 1 67056646 67058650 ECH